Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1368 ATGGATATCAGGCTGATGGGATTGGACTCTCCCTTGTTTTCCACTTTGCACCGAATCATGGATCTGACAGAGGACGCAGAGAAGAACTTAAGCGCTCCCACACGCACGTACGTACGAGATGCAAAGGCAATGGCTGCCACTCCTGCTGATGTGAAAGAGTATCCGAACTCTTACGTGTTTGTAATCGACATGCCTGGTCTAAAATCTGGAGACATCAAGGTGCAGGTGGAGGAGGACAACGTGCTGATCATCAGCGGTGAAAGGAAGAGGGAGGAAGAGAAAGAAGGAGCTAAGTATTTGAGGATGGAGAGAAGAATGGGAAAGTTCATGCGCAAGTTTACACTTCCAGATAATGCCAACACTGATGCCATATCTGCCATTTGTCAGGTTGGTGTGCTTACCGTCACCGTCAACAAGTTACCTCCCCCTGAACCCAAGAAGCCCAAGACTATTGAGGTCAAGATTGGTTAA 471 0.4798 MDIRLMGLDSPLFSTLHRIMDLTEDAEKNLSAPTRTYVRDAKAMAATPADVKEYPNSYVFVIDMPGLKSGDIKVQVEEDNVLIISGERKREEEKEGAKYLRMERRMGKFMRKFTLPDNANTDAISAICQVGVLTVTVNKLPPPEPKKPKTIEVKIG* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1368 156 Pfam Hsp20/alpha crystallin family 50 154 IPR002068 -
Vra5g1368 156 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 7 155 - -
Vra5g1368 156 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 40 154 IPR002068 -
Vra5g1368 156 Gene3D - 8 155 IPR008978 -
Vra5g1368 156 PANTHER 17.6 KDA CLASS II HEAT SHOCK PROTEIN-RELATED 7 155 - -
Vra5g1368 156 SUPERFAMILY HSP20-like chaperones 15 148 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1368 Vra-Chr5 20466540 20467289 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1368 K13993 - gmx:111605749 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1368 5 20466540 20467289 Vra5g1368 5 20466540 20467289 ECH