Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1362 ATGAAAGCATTCGCATTATCACCACCATCACTCCTTAACTTCAAATCTTTCACATTCCACCACTCTTCTTCTTCCAACCCCCTTTTCCCCCTCTCTTTTATTCTCCCCTCTCTCTCCCCCTCCCATCTCCGCCACCGCCGCCCAATCCACCGCCACTCTCCAATCATGGCCGCCGCTTCATTCAACTCCGAACGCGCCCGGGCCCCACCCGCCATTCCCATGCCCTCTCCCCCTCTGTCCAAGTTCAAAATTGGTCTCTGTCAACTCTCCGTCACTCCCGACAAAGATAGGAACATCTCCCACGCGCGCTCCGCCATTCAGGACGCTGCATCCAAGGGCGCTCAGCTTGTTCTTTTGCCTGAAATTTGGAACAGTCCTTATTCCAATGACAGTTTCCCTGTCTACGCTGAGGATATTGACGCCGGTGCCGATGCTTCTCCTTCCACCGCCATGCTCTCTGAACTCTCTCGTCTCTTGAAAATCACCATCGTCGGTGGTTCCATACCGGAACTTTCTGGGGGTCGCTTGTACAACACTTGTTGCGTTTTCGGGACTGATGGGAAGCTGCTCGCCAAGCACCGCAAGATACATCTTTTTGATATTGACATCCCTGGGAAGATTACATTTATCGAGTCAAAAACTCTTACTGCTGGGGAGACTCCGACGATTGTTGACACAGAGGTTGGACGCATTGGTATAGGCATTTGTTATGACATTCGGTTTCCAGAACTAGCAATGATATATGCTGCTAGAGGTGCTCATTTACTCTGCTATCCTGGGGCATTTAACATGACAACCGGACCATTACATTGGGAGTTATTGCAGAGGGCAAGGGCTACAGATAATCAGTTGTATGTGGCTACCTGTTCGCCTGCTCGGGATACAGGATCTGGTTATGTGGCCTGGGGCCACTCTACTCTTGTAGGGCCATTTGGAGAAGTTCTGGCTACTACAGAACACGACGAGGCTATCATCATTGCAGAAATTGATTATTCAATATTGGAGCAGAGAAGGACAAATCTCCCTATAACTAAGCAAAGACGAGGTGATCTTTACCAGTTGGTCGATTTTCAGAGGCTGAATTCCCTGTGA 1092 0.4973 MKAFALSPPSLLNFKSFTFHHSSSSNPLFPLSFILPSLSPSHLRHRRPIHRHSPIMAAASFNSERARAPPAIPMPSPPLSKFKIGLCQLSVTPDKDRNISHARSAIQDAASKGAQLVLLPEIWNSPYSNDSFPVYAEDIDAGADASPSTAMLSELSRLLKITIVGGSIPELSGGRLYNTCCVFGTDGKLLAKHRKIHLFDIDIPGKITFIESKTLTAGETPTIVDTEVGRIGIGICYDIRFPELAMIYAARGAHLLCYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARDTGSGYVAWGHSTLVGPFGEVLATTEHDEAIIIAEIDYSILEQRRTNLPITKQRRGDLYQLVDFQRLNSL* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1362 363 ProSitePatterns Uncharacterized protein family UPF0012 signature. 232 252 IPR001110 -
Vra5g1362 363 Gene3D - 79 357 IPR036526 -
Vra5g1362 363 PANTHER OMEGA-AMIDASE, CHLOROPLASTIC-LIKE 40 362 - -
Vra5g1362 363 SUPERFAMILY Carbon-nitrogen hydrolase 75 348 IPR036526 -
Vra5g1362 363 PANTHER NITRILASE-RELATED 40 362 - -
Vra5g1362 363 Pfam Carbon-nitrogen hydrolase 84 334 IPR003010 GO:0006807
Vra5g1362 363 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 82 331 IPR003010 GO:0006807
Vra5g1362 363 CDD nit 83 348 IPR045254 GO:0016811
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1362 Vra-Chr5 20427675 20433213 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1362 K13566 - gmx:100817195 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1362 5 20427675 20433213 Vra5g1362 5 20427675 20433213 ECH