Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1345 ATGGGTGCCAACAACACTAATGACTCCACCACGGAGATAGAGAAGACACAGAAGAAGGTTTCCCATTGTTGGGGAAATGCTCAAATACCCTTTGCACTTCCCTTTCTCACGCTCCCCAATTCCAACCTCGCCACTTTCCTCTCTCCGCCGCAACTCCACTCATCATTCACCGCTGTCGCTGACCATTTTTTCACCCTTCTCCACTCCCTCGCTTCTCAGAACCCCTTCCTCAACAAAATCATCTCTCTCCCCTCCCAATTTCACACCCTATGCGTCCAGATTCGGAAGCAGGATAGCGTGAGATTGGTGGGTAATCATAATTTTGCTGCTGTTTTACCTGGGGATTCGGTGGCAGGATTGGTTGTGGCTAATGGGGTTCTGAATTTCTTGAACATTTACAACACCTTGCTCATTGTTAGGCTTGTTTTGACATGGTTTCCCAACACTCCTCCTTCCATTGTTAGTCCCCTCAGCACCATATGTGACCCATACCTGAACATATTCCGTGGGCTTATTCCCCCTCTGGGAGGAACACTGGATCTCTCCCCCATTCTAGCATTTTTGGTACTAAATGCATTTACTAGCACTGCTGCTGCACTCCCTGCTGAGCTCCCAACCACAGAGCGATCCCAACAAGGTCTTGCACCACCATTACAAGCTTCTAATGTTACTACTTCACAGAACAAATGGATGAGACGGCTTCTAGGGAACAAGTCAAGGACACTTGGTGGTGATAAATAG 741 0.4804 MGANNTNDSTTEIEKTQKKVSHCWGNAQIPFALPFLTLPNSNLATFLSPPQLHSSFTAVADHFFTLLHSLASQNPFLNKIISLPSQFHTLCVQIRKQDSVRLVGNHNFAAVLPGDSVAGLVVANGVLNFLNIYNTLLIVRLVLTWFPNTPPSIVSPLSTICDPYLNIFRGLIPPLGGTLDLSPILAFLVLNAFTSTAAALPAELPTTERSQQGLAPPLQASNVTTSQNKWMRRLLGNKSRTLGGDK* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1345 246 PANTHER YLMG HOMOLOG PROTEIN 2, CHLOROPLASTIC 51 240 IPR003425 GO:0016020
Vra5g1345 246 Pfam YGGT family 129 192 IPR003425 GO:0016020
Vra5g1345 246 PANTHER YLMG HOMOLOG PROTEIN 2, CHLOROPLASTIC 51 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1345 Vra-Chr5 20337581 20339729 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1345 K02221 - gmx:100802756 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1345 5 20337581 20339729 Vra5g1345 5 20337581 20339729 ECH