Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1337 ATGCTTCCCTCATTTCTCAGCCCCGTCTCCGTCTACGGCCTCTACCTCCGCCGCTGCTTCACGGCCGCGGGCCTCTCCTCGTACACGCTGGACGTCGATAACGAAACCACGGTTCACTTTTGGGCCCCCACCAATCGAACGGCCCAAAAGCCTGCCGTGGTTCTGATCCACGGGTTTGGGCCTGCGGCCATATGGCAGTGGCGGTTACAGGTCCAATTCTTGGCCCCTCACTTCAACGTGTACGTTCCGGACCTGATATTCTTCGGAGGGTCCAGCAGCACATCGAGCGAAAGGAGCGAAACGTTTCAGGCAGCGTCGGTGGGGAAGCTTCTGGATAAATTGAAGGTGGAGAAGTTCAAGGTGGTGGGAACGAGCTATGGAGGCATGGTAGCTTACAATTTGGCGAAGATGTTCGGGGAAGAGAGGGTTGAGAAAGTGGTGATTGCTAGCTCCGGTGTTAACATGAAAAGGAGCAACAACGTGGCTTTGGTGCAGAGGGCCGAATTGGAGAAAATCGAAGACCTGATGTTACCTGCCACACCACAACAACTGCGAAAATTGATGTCGCTCTCCATCTACAAAACTCCGCAATTCCTCCCCCATTTTTTACTCAACGACTTCTTACATAAACTATACAGCGAGAATCGGAAGGAGAAAAAGGAGCTTCTGAAAGGATTAACCATCGGAAAAGATGAATCTTCAACACTTTGGCCTCTTGAACAAGAGGTTCTCATAGTGTGGGGGGAACAAGATCAAATATTTCCCGTGGAAATGGCCCGCGAATTGAAAGAAATAATCGGTAGGAAGGCTCGTTTGGAATTGATTAAGGAGGCATCCCATGTGCCTCAAATCGAGAAGCCAAGAGAATTCAACAACATTCTCCTTAATTTTTTTCAAGCCCATTCTTGA 909 0.4983 MLPSFLSPVSVYGLYLRRCFTAAGLSSYTLDVDNETTVHFWAPTNRTAQKPAVVLIHGFGPAAIWQWRLQVQFLAPHFNVYVPDLIFFGGSSSTSSERSETFQAASVGKLLDKLKVEKFKVVGTSYGGMVAYNLAKMFGEERVEKVVIASSGVNMKRSNNVALVQRAELEKIEDLMLPATPQQLRKLMSLSIYKTPQFLPHFLLNDFLHKLYSENRKEKKELLKGLTIGKDESSTLWPLEQEVLIVWGEQDQIFPVEMARELKEIIGRKARLELIKEASHVPQIEKPREFNNILLNFFQAHS* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1337 302 Gene3D alpha/beta hydrolase 15 301 IPR029058 -
Vra5g1337 302 SUPERFAMILY alpha/beta-Hydrolases 25 299 IPR029058 -
Vra5g1337 302 Pfam alpha/beta hydrolase fold 51 287 IPR000073 -
Vra5g1337 302 PRINTS Alpha/beta hydrolase fold signature 77 92 IPR000073 -
Vra5g1337 302 PRINTS Alpha/beta hydrolase fold signature 121 134 IPR000073 -
Vra5g1337 302 PRINTS Alpha/beta hydrolase fold signature 243 257 IPR000073 -
Vra5g1337 302 PANTHER SI:DKEY-122A22.2 5 298 - -
Vra5g1337 302 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 5 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1337 Vra-Chr5 20267692 20269110 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1337 48 156 Acyl Lipid Metabolism Gene Families AT4G02340 32.143 2.42e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1337 - - gmx:100812356 477.633