Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1323 ATGGAATGTAATTATCAGTGTGGCCGAAGTGTTGTAAGCTTGAAGAGAAAGTCCCCGGAAGATGAAAATCGTGTACTCTTCAACACCTTTTCTCTGGATGACCTTAATGAAGATCTCTTTGAAAGGATACTTTCATGGCTTCCAACTTCCACATTCTTTCGCCTAAGTTCTGTGTGCAAAAGATGGAAATCGGTTGCTGATTCTGCCAGTTTCAAGCTTGCCTGCTCTCACATTCCCTCGAGGGATCCTTGGTTTTTAATGGTTGCTCCCAACCTTAATCAATCTGTTATCTTTGATTCTGCTGAGGGCGCTTGGAAGAGACTAAACCACCCACCTCTTCTGCAAGAGGAATCTAACCAAAACTGCATGCCGGTTGCAGCCTCTGGTGGCTTGATTTGCCACCGGAAATTATCAGGAAATTTCATTGTGAGCAACCCCGTGACAGGATCTTGTACAGAACTTCCCCCACTTCATGCCCCGCAGCATCAACCTCTCAATGCCATTGTGATGAGCACAGCTTGCAAAGACCAACTCTCCTTCAAAATTGTCTTAGTCTTCGGTGAACTTCCAAATCTCTTGTTCAAAGTCTACGATTCAAGATCTGGCTGTTGGGATGATGAGATTGCTTTGAGGAGAAAGACAGAAGACAGTTCAATGGAACATGATTCTACTGATGACAATGTTGTGTACTTCCTCAGCAAGGCTGGAATTGTTGTGGCAAGCAACATGCAGAGAAGCCCCTCTAAGCAATATTCATCAGTTATTACCAACAAAGATGGCCAAGACATTGTGTATTTTCTTAGCTCCTCAGGGAAAGTGGTAGCATGCAATTTGACGTGCAAGTGCTTCTCTGAGTACCCCAGGTTGTTACCTGTTTTTAGTGAGTATTCCATTGATGTTGTAGAGTGCAATGGGGAGATGCTAGTTGTTTTGTTATCAGAATTCTTGGAGACTGCAACTCTTAGAGTATGGAAATATGATGAGGCTAACAGAGGGTGGCATCAGATCGCGGCAATGCCTGCAGCAGATTCTCATGAGTGGTATGGAAAGAAAGCAGACATCAATTGTGTTGGAGCTGGAAACCAAATATTGATATGCTTGAACTCCCCTGATCTATGCACTTATATTCTGTGTGATTTGGAAACCAACAAGTGGCTTGAATTGCCAAAATGTTGCATAAATGGAGAACTCATAGACTTTATGTCTGCCTTTTCATTTGAGCCTCGAATAGAGGTTTCTGTATGA 1245 0.4313 MECNYQCGRSVVSLKRKSPEDENRVLFNTFSLDDLNEDLFERILSWLPTSTFFRLSSVCKRWKSVADSASFKLACSHIPSRDPWFLMVAPNLNQSVIFDSAEGAWKRLNHPPLLQEESNQNCMPVAASGGLICHRKLSGNFIVSNPVTGSCTELPPLHAPQHQPLNAIVMSTACKDQLSFKIVLVFGELPNLLFKVYDSRSGCWDDEIALRRKTEDSSMEHDSTDDNVVYFLSKAGIVVASNMQRSPSKQYSSVITNKDGQDIVYFLSSSGKVVACNLTCKCFSEYPRLLPVFSEYSIDVVECNGEMLVVLLSEFLETATLRVWKYDEANRGWHQIAAMPAADSHEWYGKKADINCVGAGNQILICLNSPDLCTYILCDLETNKWLELPKCCINGELIDFMSAFSFEPRIEVSV* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1323 414 PANTHER F-BOX PROTEIN FAMILY, ATFBX13-LIKE PROTEIN 24 414 - -
Vra5g1323 414 SUPERFAMILY Galactose oxidase, central domain 95 391 IPR011043 -
Vra5g1323 414 Pfam F-box domain 32 71 IPR001810 GO:0005515
Vra5g1323 414 Gene3D - 26 72 - -
Vra5g1323 414 ProSiteProfiles F-box domain profile. 29 74 IPR001810 GO:0005515
Vra5g1323 414 PANTHER F-BOX/KELCH-REPEAT PROTEIN 24 414 - -
Vra5g1323 414 SUPERFAMILY F-box domain 29 87 IPR036047 GO:0005515
Vra5g1323 414 SMART fbox_2 35 75 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1323 Vra-Chr5 20128627 20131265 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1323 - - gmx:100786481 732.25