Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1315 ATGACGAGGAATGCCTTCGCTGCTCTCTACCGACACCGCGCTCCTATTCTTAAATCCGCTCATTTATATCACGACAGTTTCACTGAAATTATCTTGCGCAAATGCTTGCAGTTGGATTGCCCTTCCTCGTCATGCTTGCTGCACCGAAAGTCATATTCAACTGGTTTCACCAGCGTGCATGGCGAAACTCCCTCTGCTGAGTATGCGAGGATGAGGAGGGAATCGCTTGAAAGTAAATTTGGGCATGCTCTTGGAACTTATAGTTCGAAGAGTTTCAATGCTATCTATGGGTTTGGCCCCTTTTTGGCTTTGTACAGGGCAGCAATTATTTCATTTCATGTGTTAAGGCTAGCCATGTGGCAATTATTCGTTCAAGACATGAAAAAACGTGCTGTTAAGTTTCGTGAAACTCTAATACGCTTGGGTCCTTTCTATATCAAGCTTGGGCAGGCATTGAGCACTCGGCCTGACATATTACCAACAATATATTGCCAAGAACTTGCCAAGTTACAGGATCAAATACCTCCGTTTCCAACTGACGTTGCAATCAAATCTATTGAGAGTCAGTTTGGTGTTCCTATTGATGAAATTTTTAATGACATCACCCCGTCACCTATTGCAGCAGCATCCTTGGGGCAAGTATATAAAGCTCACCTGCATTCTGGAGAGCTGGTTGCCGTAAAGGTACAGAGGCCCGGTATGTCTCTTTCATTGACTCTTGATGCTTTGCTATTCCATATGATAGGGGGCCAATTAAAACGGTTTGCCAAGGCTCGGAGAGATCTTTTTGTGGCAGTAAATGAAATGGTTAGGCACATGTTTGATGAAATTGATTATGTCCTGGAGGGAAAAAATGCTGAGCGCTTTGCTACTCTATACTGTTGGTCTTCTGATGGGATTAAACACGAGAGAACAAATGCTGTCAAAGCTCCAAAAATATATTGGGAATACACATGCTCCACTGTGCTGACTATGGAGTGGATTGATGGAATTAAGCTTACAGATGAAACAGGCTTGACTGAAGCTTCTTTGAACAGAAGGAAGCTCATTGACCAGGGATTATACTGCTCTTTGAGGCAAATGCTTGAGGTTGGTTATTTCCATGCTGATCCTCATCCAGGAAATCTTGTTGCAATAAATGATGGATCAATTGCATATTTCGACTTTGGAATGATGGGGGATATTCCTAGGCATTATCGAATTGGACTTATTCAAATGATTGTGCACTTTGTTAATCGTGACTCTCTAAGCTTGGCAAATGACTTCCTTTCTTTGGGATTTATTCCTGAAGGGGTTGATGTACATTCAGTTTCTGATGCGCTGAAAACGTCATTCGCTGATCAGACTGGTGAATCTCAAGATTTTCAGGGAATTATGAACCAACTATATGACGTCATGTATGAATTTAATTTCTCCCTCCCACCAGATTATGCTCTTGTTATAAGAGCATTGGGATCGCTAGAAGGCACAGCTAAAGTTCTGGATCCTGATTTTAAAGTCATTGAGAGTGCATACCCCTTTGTCATTGGGAGACTTATAGCAGACCCAAACCCTGATATGAGAAGAATTTTGAGGGAACTTCTCATTCGTAACAATGGATCCATAAGGTGGAACCGGCTAGAACGCTTGGTAGCAGCAATATCTGAACAAGCTTCTGAGATAACTGGAGACCCTAGTTCTGAAAAGTTTTCAAGTTCTTCTGTTTGGAAGTTATTTGACATGCACGCTGTTGTTGATTCCACTGAAGATCTTTTATTATTCATATTATCAGACAAGGGTCTTAGAGTGCGTCTTTTCCTTCTTCGGGATATAATAGAAGCAGCTGATGTGTTTCTGCAAAATGAAGTGATTGATTGCGCATTAGATGAGAATCCTCGAGGGCAGAGAAAATTACTATTTGAGGAGCGTGATATCATGGGTAGGATTGGAAAAGGGTTTGATTATCTTTGTGAAGTAGTGAAGTTGGCGCCAGCGGAGTGGACAGCAATGCTTATTCGGATGTCCGTTAGGCCCGAGGTTCACAGATTTGCTTTAGATATTATTTCAGCTATAGCTTTGCATTCTAGCCACAAATTACAGGTAGCTTTTTGGCTCTATTTGTCAAGACTTCTTCACAAAATGACAATTTGA 2130 0.4164 MTRNAFAALYRHRAPILKSAHLYHDSFTEIILRKCLQLDCPSSSCLLHRKSYSTGFTSVHGETPSAEYARMRRESLESKFGHALGTYSSKSFNAIYGFGPFLALYRAAIISFHVLRLAMWQLFVQDMKKRAVKFRETLIRLGPFYIKLGQALSTRPDILPTIYCQELAKLQDQIPPFPTDVAIKSIESQFGVPIDEIFNDITPSPIAAASLGQVYKAHLHSGELVAVKVQRPGMSLSLTLDALLFHMIGGQLKRFAKARRDLFVAVNEMVRHMFDEIDYVLEGKNAERFATLYCWSSDGIKHERTNAVKAPKIYWEYTCSTVLTMEWIDGIKLTDETGLTEASLNRRKLIDQGLYCSLRQMLEVGYFHADPHPGNLVAINDGSIAYFDFGMMGDIPRHYRIGLIQMIVHFVNRDSLSLANDFLSLGFIPEGVDVHSVSDALKTSFADQTGESQDFQGIMNQLYDVMYEFNFSLPPDYALVIRALGSLEGTAKVLDPDFKVIESAYPFVIGRLIADPNPDMRRILRELLIRNNGSIRWNRLERLVAAISEQASEITGDPSSEKFSSSSVWKLFDMHAVVDSTEDLLLFILSDKGLRVRLFLLRDIIEAADVFLQNEVIDCALDENPRGQRKLLFEERDIMGRIGKGFDYLCEVVKLAPAEWTAMLIRMSVRPEVHRFALDIISAIALHSSHKLQVAFWLYLSRLLHKMTI* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1315 709 Pfam ABC1 atypical kinase-like domain 169 419 IPR004147 -
Vra5g1315 709 CDD ABC1_ADCK3-like 169 422 - -
Vra5g1315 709 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 38 697 - -
Vra5g1315 709 SUPERFAMILY Protein kinase-like (PK-like) 171 411 IPR011009 -
Vra5g1315 709 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 38 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1315 Vra-Chr5 20042679 20051770 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1315 K08869 - gmx:100776761 1275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1315 5 20042679 20051770 Vra5g1315 5 20042679 20051770 ECH