Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1312 ATGAAGATTGCGGTGGAAGGGTGCATGCATGGCGACCTGGACAACGTGTACAGAACCCTTCAGCACTTGGAGAAATCCCAGAACACGAAAATCGACCTTCTTCTCTGCTGCGGCGATTTCCAAGCGGTTAGGAACGAACAGGATTTGAAGAGCTTGAACGTCCCGCCCAAGTATCGCTCCATGAATTCCTTCTGGAAGTACTATTCCGGCGCCGAGGTTGCCCCTTATCCCACCATCTTCATTGGCGGCAATCACGAAGCGTCCAATTATCTCTGGGAACTGTACTATGGAGGATGGGTTGCTCCTAATATCTACTTCTTGGGAGCTGCTGGGGTCGTGAGGTTTGGGAATGTCCGAATTGGTGGTCTCTCTGGGATCTATAATGATCGACACTATAGATTAGGACGTTTTGAGAGGCCTCCCTATGATCAGAGTACCATTAGGTCTGTGTATCATGTTCGTGAGTATGATGTTCGCAAACTAATGGAACTTAAGGAGCCCATTGATGTTTTTCTTTCGCATGATTGGCCAGTTAGAATCACTGATTATGGGGATTGGAAGGAGCTTGTTCGGCGCAAGCACTATTTTAGGCAAGAGATAGAGGAAAAAAGATTAGGGAGTAAAGCTGCTGCTGAACTTCTAGAAAAACTGAAACCAAATTATTGGTTTTCGGCTCACTTACACTGCAAGTTTGCTGCTCTGGTTCAGCATGGGGAAGGAGGTCCACTGACAAAATTCCTTGCACTGGACAAATGTATTGCCGGGCGTGATTTCTTACAGATTGTGGAAATTGAATCAGATGCAGGACCTTATGAGATTCAATATGATGAAGAATGGTTAGCGATAACACGGAGGTTCAACCCTATCTTCCCTTTGACCACCAAAGGTGCAAACTTCAGAGGTTTAAATCTCGAGATGGAAGATTGTCTTGAATGGGTTAGAAGCAGGCTGCGTGAGAAAGGGTGCAAACCATTTGAATTTGTCAGAACAGCTCCTTCCTATGATCCTTCTCGGTCCAATTTTGGTGGTGCTTTGACTGTGAATCCCCGGAACCCTCAGACAGAATCTTTTTTGCAGCTTCTGGAACTTCCATATCTTCTTGATAGAAATCCTGATGCAAAGGACTTTTCACCTCATCCTTCTCTTTCGGTTAAAAGAGGCATTAGTGATGATAATGAGGACATTCCCATTGATGATGTGGATGATGATGATGATGATGATGTAGAACTCCCAAAAGTTGATAACGTTGAAAGTTGA 1257 0.4479 MKIAVEGCMHGDLDNVYRTLQHLEKSQNTKIDLLLCCGDFQAVRNEQDLKSLNVPPKYRSMNSFWKYYSGAEVAPYPTIFIGGNHEASNYLWELYYGGWVAPNIYFLGAAGVVRFGNVRIGGLSGIYNDRHYRLGRFERPPYDQSTIRSVYHVREYDVRKLMELKEPIDVFLSHDWPVRITDYGDWKELVRRKHYFRQEIEEKRLGSKAAAELLEKLKPNYWFSAHLHCKFAALVQHGEGGPLTKFLALDKCIAGRDFLQIVEIESDAGPYEIQYDEEWLAITRRFNPIFPLTTKGANFRGLNLEMEDCLEWVRSRLREKGCKPFEFVRTAPSYDPSRSNFGGALTVNPRNPQTESFLQLLELPYLLDRNPDAKDFSPHPSLSVKRGISDDNEDIPIDDVDDDDDDDVELPKVDNVES* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1312 418 Gene3D - 8 248 IPR029052 -
Vra5g1312 418 SMART DBR1_2 235 367 IPR007708 GO:0006397|GO:0016788
Vra5g1312 418 SUPERFAMILY Metallo-dependent phosphatases 1 242 IPR029052 -
Vra5g1312 418 MobiDBLite consensus disorder prediction 394 412 - -
Vra5g1312 418 CDD MPP_Dbr1_N 3 259 IPR041816 -
Vra5g1312 418 Pfam Calcineurin-like phosphoesterase 1 229 IPR004843 GO:0016787
Vra5g1312 418 PANTHER RNA LARIAT DEBRANCHING ENZYME 1 398 - -
Vra5g1312 418 MobiDBLite consensus disorder prediction 375 418 - -
Vra5g1312 418 Pfam Lariat debranching enzyme, C-terminal domain 244 364 IPR007708 GO:0006397|GO:0016788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1312 K18328 - gmx:100812726 757.288