Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1309 ATGGACCTCACGCCGCACCAGCTCAGCCAGTACAACGGCACCGACCCCTCCAAGCCCATCTACGTCGCCGTGAAGGGCCGCGTCTACGACGTCACCACCGGAAAATCCTTCTACGGTCCCGGCGGTGCCTACGCCATGTTCGCCGGCAAGGACGCCAGCAGAGCCCTCGCCAAGATGAGCAAGAACGACGAAGACATCTCCCCCTCACTCGACGGCCTCTCCGAAAAGGAGATCGGAGTTCTCAACGATTGGGAGAACAAGTTTCAAGCTAAGTACCCTGTTGTTGGTCGCGTTATCAATTGA 303 0.5842 MDLTPHQLSQYNGTDPSKPIYVAVKGRVYDVTTGKSFYGPGGAYAMFAGKDASRALAKMSKNDEDISPSLDGLSEKEIGVLNDWENKFQAKYPVVGRVIN* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1309 100 SMART Cyt_b5_2 3 99 IPR001199 -
Vra5g1309 100 Pfam Cytochrome b5-like Heme/Steroid binding domain 4 98 IPR001199 -
Vra5g1309 100 PANTHER CALCUTTA CUP-RELATED 2 99 - -
Vra5g1309 100 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 2 99 - -
Vra5g1309 100 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 3 99 IPR036400 -
Vra5g1309 100 Gene3D - 1 100 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1309 Vra-Chr5 20006507 20007196 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1309 K17278 - gmx:100813061 194.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1309 5 20006507 20007196 Vra5g1309 5 20006507 20007196 ECH