Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1308 ATGAGTGGCCAAAGCCAAAGTTGTTTAAGCAATGGAACCGAACGATCAAGGATGCATTGGACTCCATTGATGGAACGCTACTTCATTGATCTCATGTTGGAGCATTTGCAGATAGGGAACAGGGTTGGCCACACTTTTAACAAACAAGCTTGGACAGACATGCTCACCTCGTTCAATGCTAACTTTGGTTCACAGTTCGACAAAGATGTCCTGAAAACTCGGTATACCAATTTGTGGAAGCAGTTCAATGATGTCAAGAGTCTTCTTTCTCAATTCGGTTTTTCTTGGGATGCTGCCCGGCAAATGGTTGTGGCTGATGATGATTCTGTTTGGGATGCTTATTTGAAATCTCACCCTGATACTAGATGCTACAGGACAAAACCAGTGTTGAACTTTGATGATTTGTGTGTCATATATGGCAACGCTGTTGCTGACGGAAGATATAGTTTATCTAGCCATGATGTACGCCTTGATGATAAATTGCAAGGACTGCATTTGGTTGATGGGACAGGAACCGTTGCTGTACCAAGTTCTGATCGTACCAGGACGGATTGGACTGCTTCTATGGACCAGTTTTTTATAGAGCTTATGGTTGATCAGTTGAGCAGGGGCAATCGAGTGGACAATGGATTCAATAAAAAAGCTTGGACAGATATGCTAGCCATTTTCAATACTAAGTTTGGATGTCAGCATGGTAGAAGGGTTTTAAAGAATCGGTTCAAGAAACTGTTGAAATACTACCGTGATATAACAAATCTTGTAAAACAAGGCTTTTCGTGGAATGAACAACAACAAATGCTTTTAGCTGATGATGATATCTGGGATTCTTATGTCAAGGCACATCCGTATGCACGAATATATAGATCGAAAACTTTGCCAAACTATCGTGATTTAGAATTAATATTCAGAAACGTGTCTGAAAATGAGATCAGTAATCTGCAACCGGAGAAAAATCACGAAGATGTCATATCAGAAGAAACAAAGGACGGTGAACTAAAAGGAAGTCGCAACCCGAGCGGCACTGACCGAACTAGAACATATTGGACACCCCCAATGGACAGATGCCTCATTAACTTGTTATTGGACCAAGTCAAACATGGAAATAGACTTGGGCAGACATTCATTTCCCAGGCTTGGAATGACATGATTACATCTTTCAATGAACAATTCAATTCTCAATATGACAAAGATGTTCTGAAGAATCGTTACAAACATTTGAGGAAACAGTTCAATGATGTAGACCATCTTCTTCAGCATGATGGGTTCTCATGGGATGATACAAGAGAAATGATTGATGCAGAGGATCGTGTTTGGGATTCATATACTAAGGCACACCCTGAAGCTCGATCACTTAGAGTTAAAACCTTGCCTGACTATGGGAAATTGTGTATAATATTTGGAGCGAAAGGTGAACAGAAGACTGGCGTTTTCTCAAATTATGATGCTGGTTCCACAATAGAGTGGACAGAATCAATGGAACGCCGTTTTGTTGACGTTATGATTGAGCAAGTAAATAATGGAAATGGGATTGAAAATCTATTCAATGAGGAAGCTTGGATGCATTTGGCCCAAACATTCAACGGTAGATGGGGACTCCAATATGCTAAGAAGGTTCTAATGGATCAATATTTATGCTTGATGAAGAAACATGATGACATCTGCAACATTCTGAGTCACAGTGAGTTTGCATGGAATGAAACCCTACAAACAATAATTGCTGATGATGATGTCTGGGATGCATATATTAAGGATCACCCAGATGCTATCTCATATAAAAACAAGTGTTTGTATCTTTTCCATGATTTATGCAAGATTTTCGGAAACAAAGTAATGGAAATATCAAATGTCAAAGCGAGTAATCTGGAGCAGCTTCACTTGATGGAAGAAGATGATTTTACCATCGACATGGGTTTGAATGAAACATCTGAAGATTTGGTTGATATCATCAATGTTGACATATCAGAGCAAGATCTGGGAAAGGGAAGGGAAAATGATGGTGAGGAATCATTTGGGAATTTGGTGGTGAGTGGCAGCAATGAAATTGATATCGATGCCGTTGAAACAAATGGAAATTTAGATGTGGCTAGTAACAATGAAATATCGAACCAAGACAGAGAAAAACCAATGACACACCATGTGAGGAAAAGGCCTGGTACGATGATGTCTAGAGACTCAACACTTCCCAAAAAGAAGCTGCGAATGAAAGAAGCTTTGTCTGAGATGGCTAGTGCTGTGAATGCACTGATGAATAAGAGAGAGAACAGCAATTCATCATTTGAAGATGCTTTGAATGTTCTTCAGGCTATGCCTGACATAGATGAGGAGTTAGTAATGGATGCTTCTGATCTGTTGGAAGATGAGACGAAGGCAAAGATATTTTTAGCTTTGGACATCTCTTTGAGAAAGAAGTGGTTGCTTAGAAAGCTTCGATAG 2433 0.397 MSGQSQSCLSNGTERSRMHWTPLMERYFIDLMLEHLQIGNRVGHTFNKQAWTDMLTSFNANFGSQFDKDVLKTRYTNLWKQFNDVKSLLSQFGFSWDAARQMVVADDDSVWDAYLKSHPDTRCYRTKPVLNFDDLCVIYGNAVADGRYSLSSHDVRLDDKLQGLHLVDGTGTVAVPSSDRTRTDWTASMDQFFIELMVDQLSRGNRVDNGFNKKAWTDMLAIFNTKFGCQHGRRVLKNRFKKLLKYYRDITNLVKQGFSWNEQQQMLLADDDIWDSYVKAHPYARIYRSKTLPNYRDLELIFRNVSENEISNLQPEKNHEDVISEETKDGELKGSRNPSGTDRTRTYWTPPMDRCLINLLLDQVKHGNRLGQTFISQAWNDMITSFNEQFNSQYDKDVLKNRYKHLRKQFNDVDHLLQHDGFSWDDTREMIDAEDRVWDSYTKAHPEARSLRVKTLPDYGKLCIIFGAKGEQKTGVFSNYDAGSTIEWTESMERRFVDVMIEQVNNGNGIENLFNEEAWMHLAQTFNGRWGLQYAKKVLMDQYLCLMKKHDDICNILSHSEFAWNETLQTIIADDDVWDAYIKDHPDAISYKNKCLYLFHDLCKIFGNKVMEISNVKASNLEQLHLMEEDDFTIDMGLNETSEDLVDIINVDISEQDLGKGRENDGEESFGNLVVSGSNEIDIDAVETNGNLDVASNNEISNQDREKPMTHHVRKRPGTMMSRDSTLPKKKLRMKEALSEMASAVNALMNKRENSNSSFEDALNVLQAMPDIDEELVMDASDLLEDETKAKIFLALDISLRKKWLLRKLR* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1308 810 Pfam Myb/SANT-like DNA-binding domain 347 441 IPR024752 -
Vra5g1308 810 Pfam Myb/SANT-like DNA-binding domain 19 114 IPR024752 -
Vra5g1308 810 Pfam Myb/SANT-like DNA-binding domain 487 581 IPR024752 -
Vra5g1308 810 Pfam Myb/SANT-like DNA-binding domain 185 277 IPR024752 -
Vra5g1308 810 PANTHER EXPRESSED PROTEIN 10 167 - -
Vra5g1308 810 PANTHER EXPRESSED PROTEIN 175 302 - -
Vra5g1308 810 PANTHER EXPRESSED PROTEIN 484 611 - -
Vra5g1308 810 PANTHER EXPRESSED PROTEIN 324 469 - -
Vra5g1308 810 PANTHER EXPRESSED PROTEIN 696 810 - -
Vra5g1308 810 MobiDBLite consensus disorder prediction 315 345 - -
Vra5g1308 810 MobiDBLite consensus disorder prediction 704 725 - -
Vra5g1308 810 Coils Coil 734 754 - -
Vra5g1308 810 MobiDBLite consensus disorder prediction 315 338 - -
Vra5g1308 810 MobiDBLite consensus disorder prediction 704 719 - -
Vra5g1308 810 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 484 611 - -
Vra5g1308 810 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 175 302 - -
Vra5g1308 810 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 324 469 - -
Vra5g1308 810 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 696 810 - -
Vra5g1308 810 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 10 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1308 Vra-Chr5 19998214 20003335 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1308 - - vun:114196091 1492.25