Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1291 ATGGCGACTACAGATAAAGAATTGGAAGAGCAACTTCTCGAGGCCGGTAACAAACTCGCAGATCCTCCGTCATCCGTTGAGGAACTTCTCTCACTTCTAGACCAAGTAGAGAGCTTCCTATCAAAGGTTGAACAGTCACCTTCAAACTCTATGCAAATTGCACTCTCTCCATCATTGAAAGCATTGATTGCAGACAAACTTCTGAGGCACTCAGATGATGATGTCAAAGTCGCAGTTGCCTCTTGCATCAGTGAAATAACAAGAATCACTGCACCTGATGCTCCTTATGATGATGATCAAATGAAGGAGGTCTTTCAATTAATAGTATCTTCTTTTGAAAATCTACATGATACGTTAAGTCGATCATATGCAAAGAGGACCTCAATTCTTGAAACTGTTGCAAAAGTCAGATCATGTGTTGTAATGCTGGATCTTGAATGTGATGCCCTGATTTTGGAGATGTTTCAGCATTTCTTTAAAGCAATAAGGGAATATCATCCAGAAAATGTTTTTTCATCCATGGAAACAATTATGACCCTTGTTCTAGAGGAAAGTGAAGATATATCCTTAGACCTGCTGTCTACACTTCTGGCCAGAGTTAAAAAAGATGACGAGGAAGCTTTTCCAATTGCCAAAAAATTGGGTGAGAGGGTCCTTGAAAGTTGTGCAACCAAGCTTAAACCCTATTTGGGTCAAGCAGTGAAATCCTTGGGTATACCTATGGGTGATTATAGTTTGGTACTTTCTTCAATATGCCAAGACACATCTGATGCCTTGGAGAAAAATTATACATGTGTTACAAGTGAGCACACGGAAGATAAGAGTGAGTTGGCAAAACGACCACGTGAGGAGTCAGCACATGTAGTAGAAAAGGATGCAAGGGAAGTTAGTAGTCCCTCTAAACAAGAAAATCCTGATGTGAATATATCTCCAAAGTCGGTCATGAGCAATGGTGTTGCATGCGTTGAAGAAGGTACTGCTTTAACTAATTCCAAGTCCATTAAAAAGCAAGAGGATGCTGAACGCTCTAATAACTCTGAAGGTTTGAATATATCTGGTCATGAGGTGTGTAATGATTTAGACTCTGAAAAAGTTGACAATAGTAAAAGTAAGCCAGAACAATCTACCAAGAGACGACGGAAGAAATCAAGCTCTTCAACTAAATCTGCAAAACTTTCCAAGGGTCAAGTTGCTGCGAATGATAAGGAAACTGAGAAAAAGCTCGACCACGAAAACAACAGCAAGAAAGTACCCAGTTCCCCTCACGAGGACCATTTTGTTGAAGCAGCAGGACCTTCAGAGAATGACAAAGAGGTTGATGCTAAGACTTTATCATCAAAGGTATACAACAATGAATCTGGAGTTGCTTCTCCACTAAGTGAGAACCTCCATGATGAAAATCGATTGAAGAAACTTGGGCGAACAAAAAGGAAAGATGGCCCTGTAAAAGATGTGGCTGGAGAGGATGTTTCTAAGGTTTCTGGAGGAGGAGCTAGTGATTCAGAAGCCAAACCTTCGAGGCGGTCAATGAAAAAGGCACTTGGTCAGAGCTCTGTGAGAAAGGCTAGTGTTGTAGATTCAGTTAAAAAAGGAAGTGGGGCAGCAACTGATGCAGATGCTAAGAAGCATTCAGCAAAGAAATTAGATGAAAACAAAAAGGGTAGTGGCGGGTCCTCTTCAAAGCAGATTGGGGACAAGAAAAAGGGAGGGAGGACGAAAGCTAACCCTGAAACAGATCTAGCAAAATCAACTGCTACCAATGTGGACAGGGAAGTGGTTTCTTCTCCAAGGCCTGGTACAAAGTCAACTAAAGATGAAAGTTCGGAGGAGACTCCCAAGGCAAATGTGAAAAGGAAACGCAGTTCAGGAAAAGAAAATGAGTCTGATGTGAAGGACTATGGTGAAAACCTTGTTGGTTTACGAGTCAAAGTTTGGTGGCCTGAGGATCAGGAGTTTTACAAAGGTGTCATTCATTCTTTTTATTCTGGCAAAAAGAAGCACAAGGTCTTGTACGATGATGGTGATGAAGAAACATTAAATCTCTTGAAGGAAAAATGGAAGTTAATTGAAGCTGGCTCAGATGCAGACGAGGAAGGACAAAGTGATCGTGAAAGTCTTGATGCTTCCACTGATATGCCACCGAAGAAGAAAGGGAAAACCAGTGCTGATGAATCAACCAAGCAAGGAAAGGTGGACGGTTCTTCCAAAAGCGGTGGAGCAGCAGCATCCAGTAGATCAAAGGGTGCATCCATGAAGTCTAGCCAAAAGTCCAAAGATGGAAACAAATCCAAAGATTCCAAGACTATTAGCAAATCTGAGGACCGAGCTAGCAGAAAATCTAAGGACGGTACTCCTAAAAGTGGTGGCAGTAAAATCGTTGCCGCTGCCGTTAAGAAAACGAGTAATAAATCCAAAAGCTCAGATACTTCCAAGGCTAACGAATCAAAGGATGATGACACTAGCAAGCCAAAATCTGCTGCCAAGTCTAAGCAAGAAACTCCAAAAGGTGGGAAATCCAAGCAAGAAACCTTGAAGTCTGCCATTTCTAAAGGAAAACCTCTTAAAGGTGGTGGAAAGAGTGATGTTAATGGTACTGGTAAGATGAAATCTGGTTTAAAGAGAAAATATGCGGAGGATGAAAACTCAGATGCTTGA 2655 0.4147 MATTDKELEEQLLEAGNKLADPPSSVEELLSLLDQVESFLSKVEQSPSNSMQIALSPSLKALIADKLLRHSDDDVKVAVASCISEITRITAPDAPYDDDQMKEVFQLIVSSFENLHDTLSRSYAKRTSILETVAKVRSCVVMLDLECDALILEMFQHFFKAIREYHPENVFSSMETIMTLVLEESEDISLDLLSTLLARVKKDDEEAFPIAKKLGERVLESCATKLKPYLGQAVKSLGIPMGDYSLVLSSICQDTSDALEKNYTCVTSEHTEDKSELAKRPREESAHVVEKDAREVSSPSKQENPDVNISPKSVMSNGVACVEEGTALTNSKSIKKQEDAERSNNSEGLNISGHEVCNDLDSEKVDNSKSKPEQSTKRRRKKSSSSTKSAKLSKGQVAANDKETEKKLDHENNSKKVPSSPHEDHFVEAAGPSENDKEVDAKTLSSKVYNNESGVASPLSENLHDENRLKKLGRTKRKDGPVKDVAGEDVSKVSGGGASDSEAKPSRRSMKKALGQSSVRKASVVDSVKKGSGAATDADAKKHSAKKLDENKKGSGGSSSKQIGDKKKGGRTKANPETDLAKSTATNVDREVVSSPRPGTKSTKDESSEETPKANVKRKRSSGKENESDVKDYGENLVGLRVKVWWPEDQEFYKGVIHSFYSGKKKHKVLYDDGDEETLNLLKEKWKLIEAGSDADEEGQSDRESLDASTDMPPKKKGKTSADESTKQGKVDGSSKSGGAAASSRSKGASMKSSQKSKDGNKSKDSKTISKSEDRASRKSKDGTPKSGGSKIVAAAVKKTSNKSKSSDTSKANESKDDDTSKPKSAAKSKQETPKGGKSKQETLKSAISKGKPLKGGGKSDVNGTGKMKSGLKRKYAEDENSDA* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1291 884 MobiDBLite consensus disorder prediction 535 554 - -
Vra5g1291 884 SUPERFAMILY Tudor/PWWP/MBT 636 677 - -
Vra5g1291 884 MobiDBLite consensus disorder prediction 731 756 - -
Vra5g1291 884 MobiDBLite consensus disorder prediction 602 634 - -
Vra5g1291 884 MobiDBLite consensus disorder prediction 577 601 - -
Vra5g1291 884 MobiDBLite consensus disorder prediction 444 460 - -
Vra5g1291 884 MobiDBLite consensus disorder prediction 690 884 - -
Vra5g1291 884 MobiDBLite consensus disorder prediction 1 21 - -
Vra5g1291 884 PANTHER TRANSCRIPTIONAL REGULATOR 3 883 - -
Vra5g1291 884 MobiDBLite consensus disorder prediction 357 373 - -
Vra5g1291 884 MobiDBLite consensus disorder prediction 690 730 - -
Vra5g1291 884 MobiDBLite consensus disorder prediction 269 314 - -
Vra5g1291 884 MobiDBLite consensus disorder prediction 269 299 - -
Vra5g1291 884 Pfam Sister chromatid cohesion protein PDS5 protein 27 232 - -
Vra5g1291 884 MobiDBLite consensus disorder prediction 300 314 - -
Vra5g1291 884 MobiDBLite consensus disorder prediction 329 634 - -
Vra5g1291 884 SMART TUDOR_7 634 693 IPR002999 -
Vra5g1291 884 MobiDBLite consensus disorder prediction 463 486 - -
Vra5g1291 884 CDD TUDOR 639 681 IPR002999 -
Vra5g1291 884 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 3 883 IPR039776 GO:0007064
Vra5g1291 884 SUPERFAMILY ARM repeat 49 243 IPR016024 -
Vra5g1291 884 MobiDBLite consensus disorder prediction 809 839 - -
Vra5g1291 884 Gene3D - 629 683 - -
Vra5g1291 884 MobiDBLite consensus disorder prediction 398 443 - -
Vra5g1291 884 MobiDBLite consensus disorder prediction 757 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1291 Vra-Chr5 19789734 19801775 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1291 - - gmx:106794129 1209.13