Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1289 ATGGCTCTCGGATTCTTTGCCCTCGCTCTCTTCCTTTTCATCACTCTCGACTCTGACGTTGTTCCTTCTTCCGCTGCCTCCGCCTCTGCCTCCGCTGCTTCCTCCGAAGGCGTCGAGGTTCAGATTACATATGGTACGGTGCTGAAGCTTATGCACGAGAAGACCAAATTTCGGTTGCATTCTCATGACGTGCCCTACGGTTCTGGCAGTGGACAACAATCGGTCACTGGTTTCCCTAATGTGGACGATTCCAATAGTTACTGGATTGTTAGACCTCAGCCAGGAACTAATGCTAAACAAGGTGATTCCATTAAAAGTGGTACCATCATTAGATTGCAGCACATGAGGACAAGGAAGTGGCTGCACAGCCATTTGCATGCATCCCCGATATCAGGCAATCTCGAGGTGAGTTGTTTTGGGGGAGAAAATGAATCTGACACTGGGGACTATTGGAGGCTATTAATAGAGGGAAGTGGGAAGACTTGGAAGCAGGATCAGAAGATTCGCCTTCAACATATTGACACCGGAGGCTATCTACATAGTCACGATAAGAAATACAGCCGCATTGCTGGGGGACAGCAGGAGGTTTGTGGTGTTCGTGAAAAGCGTGCTGACAATGTCTGGTTGGCGGCCGAAGGTGTCTACCTTCCTGTCACTGAAAGCAAATGA 669 0.4903 MALGFFALALFLFITLDSDVVPSSAASASASAASSEGVEVQITYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTNAKQGDSIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGENESDTGDYWRLLIEGSGKTWKQDQKIRLQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTESK* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1289 222 SUPERFAMILY MIR domain 40 213 IPR036300 -
Vra5g1289 222 ProSiteProfiles MIR domain profile. 101 156 IPR016093 -
Vra5g1289 222 SMART mir_2 159 213 IPR016093 -
Vra5g1289 222 SMART mir_2 39 93 IPR016093 -
Vra5g1289 222 SMART mir_2 101 156 IPR016093 -
Vra5g1289 222 Gene3D - 25 222 - -
Vra5g1289 222 PANTHER STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN 1 222 - -
Vra5g1289 222 Pfam MIR domain 74 206 IPR016093 -
Vra5g1289 222 PANTHER MIR MOTIF, GLYCOSYLTRANSFERASE 39-LIKE PROTEIN-RELATED 1 222 - -
Vra5g1289 222 ProSiteProfiles MIR domain profile. 159 213 IPR016093 -
Vra5g1289 222 ProSiteProfiles MIR domain profile. 39 93 IPR016093 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1289 - - gsj:114414928 416.772