Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1247 ATGCTGCGTAAGCTTGTGTCAGGGCCACCCAAGAACAAGCCCGGCACCGTCCCCGTTCACCTCAACGTCTATGATCTCACCCCAATCAATGGCTATGCCTATTGGCTTGGCCTTGGTGTCTACCATTCTGGGGTTCAAGTTCATGGGGTTGAGTACGGTTTTGGTGCACATGAGCATGACACAACGGGGATTTTTGAAGTGCAACCGAAACACTGTCCTGGGTTCACTTTCAGAAAGTCGATTTTCATCGGAACAACAGATCTGGGTCAGAAAGATGTTCGCGCGTTCATGGAAAAACTGGCTCAGGAGTATTCTGGCAACACCTATCATCTCATCTCCAAAAACTGCAACCACTTCTGTAACGATGTTTGCCTCAAGTTAACGGGAAAGTCAATCCCTCGATGGGTCAATCGCCTTGCTCGACTTGGTCTTCTTTGCAACTGCGTTCTTCCCCCTGGCCTAAATGACACGAAGGTTCCACAAGCTACATCAACATCAGACAGAGTTCAGGAGGGAGAAAAGAGGAAAATAAGAAGTCAATCTTGCAGGTACGAGGGTTCTTCGAATCCTTCATTGTCACGACGTTCAGCAATTAAAAGTAGTAGCCAAAGACATTGTCTTCCAGGATCTACATCTTTGCTTAATGCTACTCCAGCCTCAACCTTAACAGTGAAGTAG 678 0.472 MLRKLVSGPPKNKPGTVPVHLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYGFGAHEHDTTGIFEVQPKHCPGFTFRKSIFIGTTDLGQKDVRAFMEKLAQEYSGNTYHLISKNCNHFCNDVCLKLTGKSIPRWVNRLARLGLLCNCVLPPGLNDTKVPQATSTSDRVQEGEKRKIRSQSCRYEGSSNPSLSRRSAIKSSSQRHCLPGSTSLLNATPASTLTVK* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1247 225 MobiDBLite consensus disorder prediction 182 211 - -
Vra5g1247 225 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 2 223 - -
Vra5g1247 225 PANTHER DESUMOYLATING ISOPEPTIDASE 2 223 IPR008580 GO:0008233
Vra5g1247 225 Pfam PPPDE putative peptidase domain 18 150 IPR008580 GO:0008233
Vra5g1247 225 MobiDBLite consensus disorder prediction 157 211 - -
Vra5g1247 225 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Vra5g1247 225 Gene3D PPPDE domains 12 169 IPR042266 -
Vra5g1247 225 SMART DUF862_2a 17 155 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1247 Vra-Chr5 18863967 18866054 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1247 K22763 - gmx:100306675 425.246