Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1246 ATGTCATCGTCGCCTTTTCCTCCCTGCTTCCGTCCCTCTCCCACCACCGACGTTCCCCCTCCTCCGCCGCCACCGCCGCCGCACTCCACAATCTCAAACCTCACAATCTACCACACAGACACAGGTCCCGTGTCCCTCACGTGGTCACGCTCCGTAGTGGGTCGCTCCCTTCACATTCAACTCCACCGCCAATCTTTAGACTCCATCTCCTTCCACCTCCACATACGACCCTTCGTCTTCTGGAAAAAGCACGGTGTGAAGAAGCTGGCCCCCGACACAGTCCTCTTCTGGAACCTTGCCAAGGCCAAATTTGGGTCGAACCCGGAACCCGTTTCGGGATTCTACGTTGCCCTTGTGGTTAACAGCCACATGAGCCTCCTCCTCGGCGACGCCGCCAGAGACGCGTATTCGAAGTCCCGGGCCCACCAACCGGCCACCCCGCAACTGCTCCTCCTCAAGAAAGAGCACATCTTCGCCGACCGCGTCTACTCCACGCGCGCAACGTTCGGCGGCCGGGCGCGTGAGATTCAGATCGATTGCGGTTTCAGGGACCACTCCAAACTCTCGTTCAGCGTGGACGGCGAGAAGGTGCTGCAGATTAAGCGCCTCAAGTGGAAGTTTCGCGGCAATGAGCGCGTCGTAGTTGACGGCGTGCACGTGCAAATCTCGTGGGACCTTTACAACTGGCTCTTCGACAAGAACAACGCCGACGCGCACGCCATTTTCATGTTCAAGTTCGAGGACGAGGAGGAAGAAGCGGTGGCTGATAGGAACTTGGCGGGGTTGTGGAATTTGGGGGTTTGTGAATGGGGCAAGACTTGGTCTTCTTCCTCGGTTTCTTCTTCTGGTGGGTCCTTCGGCGGAAGCTCCTCTGTTTTGGAATGGTCCAGTGTGGAGGAGAATGAGTTGGTCGTTCCCGTTGGGTTCTCTTTGCTCGTTTACGCTTGGAAACGCTGA 957 0.5758 MSSSPFPPCFRPSPTTDVPPPPPPPPPHSTISNLTIYHTDTGPVSLTWSRSVVGRSLHIQLHRQSLDSISFHLHIRPFVFWKKHGVKKLAPDTVLFWNLAKAKFGSNPEPVSGFYVALVVNSHMSLLLGDAARDAYSKSRAHQPATPQLLLLKKEHIFADRVYSTRATFGGRAREIQIDCGFRDHSKLSFSVDGEKVLQIKRLKWKFRGNERVVVDGVHVQISWDLYNWLFDKNNADAHAIFMFKFEDEEEEAVADRNLAGLWNLGVCEWGKTWSSSSVSSSGGSFGGSSSVLEWSSVEENELVVPVGFSLLVYAWKR* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1246 318 Pfam Plant protein of unknown function (DUF868) 42 317 IPR008586 -
Vra5g1246 318 MobiDBLite consensus disorder prediction 1 28 - -
Vra5g1246 318 PANTHER OS08G0422401 PROTEIN 1 317 - -
Vra5g1246 318 PANTHER EXPRESSED PROTEIN 1 317 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1246 Vra-Chr5 18854647 18857118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1246 41 317 EF-hand Containing Proteins AT3G04860 31.930 1.63e-46 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1246 - - gmx:100783731 503.827