Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1241 ATGGCGTCCAAGAAGAAGCACTCAGAGGGAATCGCGTTGTTGTCCATGTACAACGACGAGGAAGACGATGAAATGGAGGTCGACGACGAAGAAGAAGATGCAAGAATAGGTATGGAAGAAGATGCCGCGGCAGATGCGAGATTTGCAGCGGAGGAAGATTCTGCCAATAGAACAGCGGTCCTTGATTCAGGTAAGGAGGCCGCTGATGAGGGGGCTTCAACGCCGCAGAATAACAATTTTGTTTCTCCACCGCCGGAGGAACCTAGAATTAGTCGGAAAGGGGCGCTTACGATAGTTGATTATGGGCATGACGAAGTTGCGATGTCACCTGAGCCTGAGGAGGGGGAGATATATGGTAGCGGTCGAGTCATGTTTGGGGACCAGCTTCATATCACCAATGGGGATTTACTGGAGAGAACGCCATTAGGAACAGTCCAAGCTTCGACACCTAGCAATCATGCTAACACTCCTCAGTTATCTGAACCATTGAAATCTGATACCTTGAACAATGATGATGTCATCAAATCTGATGATGCAGAATTGGGTGAAAGAGATCAAGATGATCAAAGATATGTAGATCCATTGGATAAATTTCTTCCTCCCCCACCCAAAACTAAATGGTCAGAGGACCTACAAAGAAAAATAAATAAATTCCTGGAGTACAAGAAGGCTGGAAAAAGTTTTAATGCAGAAGTTCGTAACAGGAAGGACTATCGAAACCCTGACTTCTTACTGCATGCAGTGAGGTACCAGGATATTGATCAAATTGGGTCTTGCTTCAGTAAAGATGTATTTGACCCTCATGGATATGATTCAAGTGACTTCTATGATGAAATAGAAGCTGATATGAGGCGTGAAAGTGAGAGGAAAGAGCAAGAGAAAAAGAAAGCACAGAAAGTTGAATTTATTGCAGGGGGCACGCAGCCAGGAATTGTAGCTAGCGCTCCTAGGATTGGCATACCTGTTGCAGGTGCTTCTGCTGTGACTGCAAGTGGTTTGCCTTTGGTGCCTCCTACAGCTGATTCTCGAGATGGTAGACAAAATAAAAAATCAAAATGGGATAAGGTGGATGGTGATAGAAAAAATCCTCTGCCCTCTTCGGGGCAGGATTCTGTATCTACTATTGGGGCTCATGCAGCACTTTTATCTGCTGCTAATGCTGGTGGTGGATACATGCAATTTGCGCAACAAAAACGGCGGGAGGCAGAGGAGAAAAGATCTAGTGAAAGGAGGTTGGAAAGAAGATCGTGA 1251 0.4524 MASKKKHSEGIALLSMYNDEEDDEMEVDDEEEDARIGMEEDAAADARFAAEEDSANRTAVLDSGKEAADEGASTPQNNNFVSPPPEEPRISRKGALTIVDYGHDEVAMSPEPEEGEIYGSGRVMFGDQLHITNGDLLERTPLGTVQASTPSNHANTPQLSEPLKSDTLNNDDVIKSDDAELGERDQDDQRYVDPLDKFLPPPPKTKWSEDLQRKINKFLEYKKAGKSFNAEVRNRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYDSSDFYDEIEADMRRESERKEQEKKKAQKVEFIAGGTQPGIVASAPRIGIPVAGASAVTASGLPLVPPTADSRDGRQNKKSKWDKVDGDRKNPLPSSGQDSVSTIGAHAALLSAANAGGGYMQFAQQKRREAEEKRSSERRLERRS* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1241 416 MobiDBLite consensus disorder prediction 329 372 - -
Vra5g1241 416 Pfam HCNGP-like protein 199 292 IPR012479 GO:0006355
Vra5g1241 416 Coils Coil 392 415 - -
Vra5g1241 416 Coils Coil 276 300 - -
Vra5g1241 416 MobiDBLite consensus disorder prediction 168 194 - -
Vra5g1241 416 MobiDBLite consensus disorder prediction 142 167 - -
Vra5g1241 416 MobiDBLite consensus disorder prediction 397 416 - -
Vra5g1241 416 MobiDBLite consensus disorder prediction 138 206 - -
Vra5g1241 416 MobiDBLite consensus disorder prediction 16 34 - -
Vra5g1241 416 MobiDBLite consensus disorder prediction 392 416 - -
Vra5g1241 416 MobiDBLite consensus disorder prediction 47 91 - -
Vra5g1241 416 MobiDBLite consensus disorder prediction 1 34 - -
Vra5g1241 416 MobiDBLite consensus disorder prediction 343 361 - -
Vra5g1241 416 MobiDBLite consensus disorder prediction 70 84 - -
Vra5g1241 416 PANTHER TRANSCRIPTIONAL REGULATOR PROTEIN HCNGP 1 388 IPR012479 GO:0006355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1241 - - var:108330631 690.649