Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1240 ATGGCAACTCCAAAGCCAGAGGAGATAAGCCACCCACCAATGGACCAACTTCAAGGCTTAGAGTACTGCATAGACTCAAACCCTTCATGGGTGGAGTCAATAGTTTTGGGTTTCCAGCATTACATTTTGGCCTTAGGAACTGCCGTCATGATTCCTTCTTTTCTTGTGCCTTTGATGGGTGGAACTGATGATGATAAAGTGAGGGTGGTGCAGACCCTGCTTTTTGTTGAAGGAATTAATACACTTCTGCAGACACTCTTTGGAACCCGGTTGCCAACAGTGATAGGAGGGTCTTATGCATTTATGGTCCCCATTATATCGATAATTCACGATTCCTCATTGACAACGATTGAGGACCCACATTTGAGGTTTCTTAGCACCATGAGAGCAGTACAAGGGGCAATGATAGTGGCATCAAGCATACAAATTATTTTGGGTTTTAGTCAATTATGGGGCATTTGTTCTAGATTTTTCAGTCCTCTTGGAATGGTTCCAGTAATTGCATTAGCTGGTTTTGGGTTATTTGACCGAGGCTTCCCTGTGGTCGGTCACTGCGTTGAAATTGGAATTCCCATGTTGATTCTGTTTGTAGTCTTCTCTCAGTACTTGAAAAATTTTCATACTAGAGAGCTACCTATACTAGAGCGATTTGCCCTACTAATATCGACCACAGTGATATGGGCATATGCACATCTGTTAACAGCTAGTGGAGCATACAAACACCGTCCTGACTTAACCCAACATAATTGCAGAACAGACAGGGCCAACCTCATTTCTTCTGCTCCATGGATAAAGATCCCATACCCTCTTGAGTGGGGTGCTCCAACATTTGATGCTGGTCATGCTTTTGGGATGATGGCTGCTGTCTTAGTCTCCTTAATTGAGTCAACTGGGGCATACAAAGCTGCATCAAGACTGGCGAGTGCAACACCACCTCCTGCTCATGTTCTAAGCCGTGGTATTGGTTGGCAGGGAATTGGAATATTGCTGAATGGCCTTTTTGGAACACTCACTGGTTCATCAGTTTCTGTAGAGAATGTGGGGCTACTTGGAAGTACTCGTGTTGGGAGTCGAAGGGTCATTCAAATCTCAGCTGGTTTTATGATATTCTTCTCAATGTTAGGAAAATTTGGAGCTTTATTTGCATCAATACCCTTCCCCATTTTTGCAGCACTGTACTGTGTTCTGTTTGGTCTTGTGGCTTCTGTGGGGCTATCATTCTTGCAGTTCACTAACATGAACTCAATGAGGAACCTCTTTATTACTGGTGTAGCCCTTTTCTTAGGGTTTTCTGTTCCTGAGTATTTCCGAGAATACAGTTCAAAGGCCCTTCATGGTCCTACTCATACAAGGGCTGGATGGTTCGATGATTTCCTTAATACTATATTCTTCTCATCTCCAACTGTTGCATTGATTGTTGCTGTGTTCTTGGACAACACTCTTGACTACAAGGATAGTGCGAAAGATAGGGGAATGCCATGGTGGGCCAAGTTTAGAACTTTTAATGGAGATGGCAGGAATGAAGAGTTTTATACCCTTCCTTTCAACCTTAACCGGTTTTTCCCTCCTCGGTAG 1575 0.4356 MATPKPEEISHPPMDQLQGLEYCIDSNPSWVESIVLGFQHYILALGTAVMIPSFLVPLMGGTDDDKVRVVQTLLFVEGINTLLQTLFGTRLPTVIGGSYAFMVPIISIIHDSSLTTIEDPHLRFLSTMRAVQGAMIVASSIQIILGFSQLWGICSRFFSPLGMVPVIALAGFGLFDRGFPVVGHCVEIGIPMLILFVVFSQYLKNFHTRELPILERFALLISTTVIWAYAHLLTASGAYKHRPDLTQHNCRTDRANLISSAPWIKIPYPLEWGAPTFDAGHAFGMMAAVLVSLIESTGAYKAASRLASATPPPAHVLSRGIGWQGIGILLNGLFGTLTGSSVSVENVGLLGSTRVGSRRVIQISAGFMIFFSMLGKFGALFASIPFPIFAALYCVLFGLVASVGLSFLQFTNMNSMRNLFITGVALFLGFSVPEYFREYSSKALHGPTHTRAGWFDDFLNTIFFSSPTVALIVAVFLDNTLDYKDSAKDRGMPWWAKFRTFNGDGRNEEFYTLPFNLNRFFPPR* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1240 524 Pfam Permease family 33 436 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vra5g1240 524 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 1 523 - -
Vra5g1240 524 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 2 1 523 IPR029948 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1240 Vra-Chr5 18786383 18790310 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1240 5 523 Organic Solute Cotransporters AT2G34190 86.127 0.0 937
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1240 - - gmx:100820526 1034.63