Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1233 ATGTATAGAGTAGCAAAGGCATCAGAGTATCTTGTGATCACTGGGGTTGGAATCAAAGACATAAAACTTGCAAAAAAAGCATGGATTTTCCCAGGCCAGTCATGCAGCGTATTCGACCTCTCTCCTGTGAACTACACTTTCGAGGTTCAAGCCATGAGCGCAGAGAAGCTCCCTTTCATTCTCCCCGCAGTCTTCACCATTGGTCCCAGAGTTGACAATCACGACAGCCTTCTGAAATACGCCAAACTTCTCTCTTCCCACGACAAGCTCTCTCACCACGTCAAGGAGCTAGTCCAGGGCATCATCGAGGGAGAGACACGTGTCCTTGCGGCATCCATGACCATGGAGGATGTTTTCAGAGGCACCAAGTCGTTTAAACAGGAAGTGTTTGACAAGGTTCAGTTGGAGCTCAACCAATTTGGGCTTCTCATCTACAACGCCAACGTGAAGCAACTGGTGGACGTGGTTGGCCACGAATACTTCTCTTATTTGGGTCAGAAGACTCAGATGGAGGCTGCCAACCAAGCCAAGGTTGACGTGGCAGAGGCAAGGATGAAGGGAGAGGTTGGAGCCAAGTCGAGGGAGGGGCAGACGTTGCAGAACGCTGCGAGGATCGATGCGGAGACAAAGATAATATCGACGCAGAGGCATGGAGAGGGAGTGAAGGAGGAGATAAAGGTGAAGACGGAGGTGAAGGTGTTTGAGAATGAGCGAGAGGCGGTGGTGGCGGAGGCTAATTCTGAGCTTGCGAAGAAGAAAGCTGTGTGGGCAAAAACGGCGCAGGTGGCAGAAGTGGAGGCCATAAAAGCAGTGGCACTAAGGGAAGCCGAGTTGCAGAGAGAGGTTGAGAGGATGAACGCTCTCACTATGACAGAGAAGCTTAAAGCCGAGTTCCTCAGCAAAGCAAGTGTTGAGTACGAAACTAAAGTACAAGAGGCAAATTGGGAGCTGTACAAGAAGCAAAAAGCTGCAGAAGCAATACTGTTTGAGAAGGAGAAGGAGGCAGAAGCACAAAAAGCACTAGCAGAGGCAGCATATTTCAGTCGACAACAAGCAGCAGAGGCAGAGCTATTTGCAAAGAAAAAGGAGGCAGAAGGACTTGTGGCAATTGGAGAAGCCCAAGGGGTATACTTGAGAACACTTCTTGATGCACTGGGAGGGAACTACAGTAATCTAAGGGACTACTTAATGATAAATAATGGGATGTTTCAAGAGATTGCGAAGACTAATGCAGAAGCCATTAGAGGACTTGAGCCAAAGATTAGTATTTGGACTAATGGGGGAAATGGAAGTGATGTTGGTGGTGGAATGAAGGATGTAGGTAGTGTGTACAAGATGTTACCACCTTTGTTTAACACGGTGCATGAACAAACTGGTATGCTGCCACCCGCTTGGATGGGAACCCTATCTGACAAAACTTCTTAA 1425 0.4828 MYRVAKASEYLVITGVGIKDIKLAKKAWIFPGQSCSVFDLSPVNYTFEVQAMSAEKLPFILPAVFTIGPRVDNHDSLLKYAKLLSSHDKLSHHVKELVQGIIEGETRVLAASMTMEDVFRGTKSFKQEVFDKVQLELNQFGLLIYNANVKQLVDVVGHEYFSYLGQKTQMEAANQAKVDVAEARMKGEVGAKSREGQTLQNAARIDAETKIISTQRHGEGVKEEIKVKTEVKVFENEREAVVAEANSELAKKKAVWAKTAQVAEVEAIKAVALREAELQREVERMNALTMTEKLKAEFLSKASVEYETKVQEANWELYKKQKAAEAILFEKEKEAEAQKALAEAAYFSRQQAAEAELFAKKKEAEGLVAIGEAQGVYLRTLLDALGGNYSNLRDYLMINNGMFQEIAKTNAEAIRGLEPKISIWTNGGNGSDVGGGMKDVGSVYKMLPPLFNTVHEQTGMLPPAWMGTLSDKTS* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1233 474 Coils Coil 268 288 - -
Vra5g1233 474 Gene3D Band 7 domain 38 155 IPR036013 -
Vra5g1233 474 PANTHER FLOTILLIN-RELATED 2 470 IPR027705 -
Vra5g1233 474 PANTHER FLOTILLIN-LIKE PROTEIN 3 2 470 - -
Vra5g1233 474 SUPERFAMILY Band 7/SPFH domain 33 172 IPR036013 -
Vra5g1233 474 CDD SPFH_flotillin 28 175 - -
Vra5g1233 474 Pfam SPFH domain / Band 7 family 9 183 IPR001107 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1233 Vra-Chr5 18703865 18705740 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1233 K07192 - gmx:547522 775.778