Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1225 ATGGGTTGGAGATACAACGCTGGCTTGTTCCTAATAGCCACTGTCGTTGTTATTTGGGTTACCTCCGCTGAAGTTACCCAGGATATTTTTACAGATTATAAGCAGCCGTTTGCAGTGACATATCTTGGAGCTTCTCTTATGGTAGTTTACCTCCCAATAGCATTCATTAAGGACTGGTTCTGTAACTTACTTAAATCCCGCTCCTCTAAAAGTGGTAAAAATGCAGAGTGCGTGGATGAGTTTTCTGTCAGCATTAGCTCTCCTCTCAAAAGCAATGGAATGCAGAAAAACTTTGAACTAGAACTGGGGAGTGTGATTCGGAAAGATAGTGATTTAGATCTTGCGACACTTTCAGAAGTAAAGCCATTGGTAGCTAAATATAATGATGATACTAATGTGCTAAAGGTGGAGAAAGAACTTACTGCGAAGGAAATTGCTGCTTATGGGTTTTACATTGCACCTATCTGGTTTATAACAGAGTACCTATCAAATGCTGCCCTTGCACGAACAAGTGTTGCAAGTACAACAGTATTATCATCAACTTCAGGACTTTTCACACTTTTCATTGGCGCATTTATGGGTCAAGACTCTTTAAATGTAGCAAAAGTAGTTGCTGTCTTAGTCAGCATGGCTGGGGTTGTCATGACAACGATGGGGAAAACTTGGGCTGCGGATGAATCTCAATTAAGTGATGCCAATGGAAAGCATTCTTTGGTTGGCGATCTTTTTGGAATTCTCTCAGCTATGTCATATGGCCTATTTACAGTTCTTCTTAAGAAATTTTCTGGCGAAGGAGAAAGGGTTGATGTGCAAAAGCTGTTTGGGTATATTGGATTGTTTACCCTAGTAGCACTGTGGTGGCTTGTCTGGCCATTGATGGCCTTAGGAATTGAACCAAAATTCAGCATTCCCCACTCTGCTAAACTGGACGAAGTGGTTCTTGCAAATGGATTTATTGGAAGCGTACTTTCAGATTACTTCTGGGCACTTTGCGTAGTATGGACTACTCCCCTTGTGGCCACTTTGGGTATGTCACTCACCATTCCTCTGGCAATGGTGGCTGACATGGTAATTCATGGTCGACATTATTCAGCAGTATACATTCTTGGCTCAGCCCAGGTATTTGCAGGCTTTGTAATAGCTAATCTTTCAGACAGGTTGACGAAGAAGTTGGGATTGTAG 1182 0.4188 MGWRYNAGLFLIATVVVIWVTSAEVTQDIFTDYKQPFAVTYLGASLMVVYLPIAFIKDWFCNLLKSRSSKSGKNAECVDEFSVSISSPLKSNGMQKNFELELGSVIRKDSDLDLATLSEVKPLVAKYNDDTNVLKVEKELTAKEIAAYGFYIAPIWFITEYLSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDSLNVAKVVAVLVSMAGVVMTTMGKTWAADESQLSDANGKHSLVGDLFGILSAMSYGLFTVLLKKFSGEGERVDVQKLFGYIGLFTLVALWWLVWPLMALGIEPKFSIPHSAKLDEVVLANGFIGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAVYILGSAQVFAGFVIANLSDRLTKKLGL* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1225 393 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 1 392 - -
Vra5g1225 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 278 387 - -
Vra5g1225 393 Pfam EamA-like transporter family 139 217 IPR000620 GO:0016020|GO:0016021
Vra5g1225 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 220 - -
Vra5g1225 393 PANTHER OSJNBA0070O11.5 PROTEIN 1 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1225 Vra-Chr5 18641050 18646609 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1225 K15289 - gmx:100792013 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1589 6 31363957 31369646 Vra5g1225 5 18641050 18646609 PCT