Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1224 ATGATTTGGACTGATAGTTGCCATCAGTCACCATCTGATCTTCCATTCTTGTCTTTTCCAATTTCTGTTTTCTCTTCTTTCCCTTTCTTTCTCCTCTCTTCTACTTCCTTCCACACTCCAAAGTACACACAAATCAAATCAACTGAATTTCGTTTGGTCTCTTTTCAGTCTATCATGGATGACCCTCCCAAACACCGTCTCCTAACTCTCCTAATCGCTCTCAAAGAAGCTTCCAAAGCCCTTCACACCAACACCAACCCTTTCTCCTTCCTCTTCTTAACAGATTCCAGCGCCGCCATTGACGAGCTCCTCGACCTCGAAGCCAAGGCCCACGCCGTCTTCTCCTCCGACCCTAACCTCCACAACCTCTCTCGCATCCTCTCCTCCCTCCCATCCCTAATTGATAAACTCCACAAACACCGCGGCTACTTCCCACGATCCCTCCTCCAACGCCACCTTACCAAATGCAAGATATCCCACCTCGCCAGCACCATCCAATCCGAAATCCAAAAGTACATCGACCGCGTCGCCGTTCGCGATCTCGTCGACGCGCTGCAGGAGCCGCCGTCGCGGCACGACGAAGAACAGCGCCAGGTCAAGGCTCTCGTGGAGTTCCGGCAGAGGCTCTCTCAGGGCTTCGATTTGGAGTTCCAGGACCTGGTTCTGCGCGCGAAGGTGTTCACGCTCTTGGAGTGCGTGCTGTTCGAGAAGTCGAATTATAGTTCAAAGCACGTGAAAGAGGAAGCGGCGATGACCATAGCAGCGCTGGTGAAGTTCAACAAGAACGTGTTCGTCGGGCTGGTGCTGATGGGCCCCACCATCAAGGCCTTGATAGCGATGGGTTCGGCGTGCTCCATTCGCGTTCTGTCGTCGCTGATTAATTTCATTCGAAGCCCCCTGATTGATGAGATTCTGTGCAGCGGTGAGATCCCTAAAATCATAGGGTTTATGCGTTCGAGGGAATTAGGGCTTCGCGTTGCGGCGTTGGATTGCGTTTTGGAATTGGGATATATAGGGAGAAGGGAAGTGGTGGAAGCGATGGTGAAAGAGGGAGTGATTGAAATTCTAATGGACTTGCAAAGAGAGGGGTGCAGTGAGTGTGAGTGTGATTTGGCTTTTGGGAATTGCGTTTCTAGGTTTGCGATTCAAGTGGAAGTGGGCGAGGGATTAAGCTCCCAAGAGAAGAGAGAGATTAAATCAGAAATACTGAATATTGTGAAGGAAGTTTCGCAAAGTGAAGCAGAGTTTGCGACTGTTAGCGCTGAAATTCTGTGGGGTTCTTCGCCTTAA 1290 0.5054 MIWTDSCHQSPSDLPFLSFPISVFSSFPFFLLSSTSFHTPKYTQIKSTEFRLVSFQSIMDDPPKHRLLTLLIALKEASKALHTNTNPFSFLFLTDSSAAIDELLDLEAKAHAVFSSDPNLHNLSRILSSLPSLIDKLHKHRGYFPRSLLQRHLTKCKISHLASTIQSEIQKYIDRVAVRDLVDALQEPPSRHDEEQRQVKALVEFRQRLSQGFDLEFQDLVLRAKVFTLLECVLFEKSNYSSKHVKEEAAMTIAALVKFNKNVFVGLVLMGPTIKALIAMGSACSIRVLSSLINFIRSPLIDEILCSGEIPKIIGFMRSRELGLRVAALDCVLELGYIGRREVVEAMVKEGVIEILMDLQREGCSECECDLAFGNCVSRFAIQVEVGEGLSSQEKREIKSEILNIVKEVSQSEAEFATVSAEILWGSSP* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1224 429 SUPERFAMILY ARM repeat 177 363 IPR016024 -
Vra5g1224 429 PANTHER - 61 362 - -
Vra5g1224 429 PANTHER - 366 429 - -
Vra5g1224 429 Gene3D - 150 368 IPR011989 -
Vra5g1224 429 PANTHER ARMADILLO-TYPE FOLD PROTEIN-RELATED 61 362 - -
Vra5g1224 429 PANTHER ARMADILLO-TYPE FOLD PROTEIN-RELATED 366 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1224 Vra-Chr5 18633535 18635356 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1224 - - vra:106761341 793.112