Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1210 ATGTCGCCGATCAAGTGCTGGGCCACCAGGATTTCCGGGCACGCCAACAACCGGGAGCTCAAGGTTACCCAACTCAAGCTCCAATTGGGTCTCTTCGGAACCACCCTGGGTTCCCCAAACGACAAGCTCGCCTTCGAAATAACAGGGACCGCTACGAACAAAGAAAAGAAACCTTCTTCTTCCAAACAGAAAACGACACCTCTCTCACTCGCTCCTTTCTCAAAACGACGATGTTCTCACGCAACCTCTTCCTGTAGGTCCATCAGTTCCAAATCCCCCTCTCTAACATGGGACGAGCGCGACCTCTGCGCTTTTCATCTTCTTCTCAAAGACAACCCCCTCGATGTTTGCGACCTCGCATTTCTTGTCTTATATGGAGAGGGCGGTGGGGGAGAGGCGAAAGCGAAGATGACGGTGGTCGGAAAAGCGGAAATGAGCATGGCGGTGGCGGAGCTGATGGGGAGGGAGGAGAAGAAGACGAAGTCCAATTCTCATAATCAATTTCAAAGAAGGCTTCCAATCAAGTTGAGGGTCAATGGTTTATGCATAGAAGCTACCCTTTTGGTCTCTATAAGGTTATTGAAGTTGAGAGATTCTGATTCTAAGGGTGACTCGGTTTCAGCAAAACCCTTTGAAAACAGCGTCCAGCCAAAGAAGAAACACGGGATTATAGAGAAAGTAAAGCATTTAACAAGCTTGGGAAAGAAAAACAATGGCAAGATTGACGAATCAAAACAAACCAGTCCTTGTGACTCGGATAGATCCCCCATGTTTGACTCCGATGATTCATCCAACGATTCCAACACAAGCAGTGCTAGCAACAACAGTGGAACCCACAACATACGGCCAACACTCACAAAGGGCTCTGAGAGATTTACGACCTCAGACAGAAAGACTCGTTTGCAGAGGAATAGAAGCCTCAATGGGTGGAACTTTCAGACACCCACTACTGACAAACAACAAACTCAAACCTCGTACCCTGGTCCTTTCACGAAACCAAATGAAGTTTTTCCACAAGTATACCAGAAAGGCACTGCAAGAAGTTGGGAATACAAGGAGATTAAAAGTAGAGATGGGAAGGCAAAGCTGAAAACCAATGTATTCTTTGCTTCCTTTGACCAAATGAGTGAAAGAGCTTGTGGTGAGAGTGCGTGCACGGTTTTGGTTGCACTCATAGCCCATTGGCTTCACTCAAACTATGGTATGCCAACGAGAGCGCAATTCGAAAAACTCATCACACAAGGTTCATCAGAATGGAGAAGGCTATGTAAGAGTGATTACTACTCGAAGCTCTTCCCAGATAAACATTTTGACCTTGAGACGATCATGGAAGCCAATCTACGACCTCTTGTTGTTCTGCCTCAGAAATCGTATACGGGGTTTTTCTCCCCCGAGAAGTTTCAGTGCTTAAAAGGAGCCATGTCGTTTGATGAAATTTGGGACGAGATAAAGATGAAGGTGGGTGATCATGAGCCAAGAATTTACATAGTGAGTTGGAATGATCATTTCTTTGTGTTGAAGGTAGAAAGAGATGCTTACTACATCATTGACTCTTTGGGGGAGCGACTTTTTGAAGGGTGTCAACAGGCATTCATATTGAAGTTTGATGATTCGAGTTTGATTTATAAGAAACACACCACAAAAGAGGAGCCTTCAAAGGGAGAAAGTCGTGAGATAATTTGTAGTGGAAAAGAGTGTTGTAAAGAGTTCATCAAACGCTTTCTGGCGGCTATACCACTTTGGCAAATGGAAAAGGAGGAGAAGAAATGGAGTGTTTCAAGTCCCTATCTTCATCGACAATTGCAGATCGATTTCCATTATAGCTCTTCTTCTTCCTCTACCTCTTCTTCTTCATCATCTTCTTCTTCTTCTTCTTCTGTTACTTCAACTGATTCTTTGTGGTCTCTCTTATCAAGTGGAACATTAAATTAG 1932 0.4446 MSPIKCWATRISGHANNRELKVTQLKLQLGLFGTTLGSPNDKLAFEITGTATNKEKKPSSSKQKTTPLSLAPFSKRRCSHATSSCRSISSKSPSLTWDERDLCAFHLLLKDNPLDVCDLAFLVLYGEGGGGEAKAKMTVVGKAEMSMAVAELMGREEKKTKSNSHNQFQRRLPIKLRVNGLCIEATLLVSIRLLKLRDSDSKGDSVSAKPFENSVQPKKKHGIIEKVKHLTSLGKKNNGKIDESKQTSPCDSDRSPMFDSDDSSNDSNTSSASNNSGTHNIRPTLTKGSERFTTSDRKTRLQRNRSLNGWNFQTPTTDKQQTQTSYPGPFTKPNEVFPQVYQKGTARSWEYKEIKSRDGKAKLKTNVFFASFDQMSERACGESACTVLVALIAHWLHSNYGMPTRAQFEKLITQGSSEWRRLCKSDYYSKLFPDKHFDLETIMEANLRPLVVLPQKSYTGFFSPEKFQCLKGAMSFDEIWDEIKMKVGDHEPRIYIVSWNDHFFVLKVERDAYYIIDSLGERLFEGCQQAFILKFDDSSLIYKKHTTKEEPSKGESREIICSGKECCKEFIKRFLAAIPLWQMEKEEKKWSVSSPYLHRQLQIDFHYSSSSSSTSSSSSSSSSSSSVTSTDSLWSLLSSGTLN* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1210 643 MobiDBLite consensus disorder prediction 200 335 - -
Vra5g1210 643 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 7 623 - -
Vra5g1210 643 MobiDBLite consensus disorder prediction 52 69 - -
Vra5g1210 643 MobiDBLite consensus disorder prediction 214 260 - -
Vra5g1210 643 MobiDBLite consensus disorder prediction 49 69 - -
Vra5g1210 643 MobiDBLite consensus disorder prediction 608 643 - -
Vra5g1210 643 PANTHER - 7 623 - -
Vra5g1210 643 MobiDBLite consensus disorder prediction 261 290 - -
Vra5g1210 643 MobiDBLite consensus disorder prediction 304 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1210 Vra-Chr5 18509053 18512282 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1210 - - pvu:PHAVU_009G092800g 1036.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1210 5 18509053 18512282 Vra5g1210 5 18509053 18512282 ECH
Vra6g1572 6 31083326 31086357 Vra5g1210 5 18509053 18512282 PCT