Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1197 ATGGGAAAAGGTGGATCTCTGAGCGATGGCGTTGTGAAGAAGATCGTGCTATCCTACACCTACGTTGCCATATGGATCTTCCTCAGTTTCACTGTAATCGTCTACAACAAGTACATCCTCGACAAGAAGATGTACAACTGGCCATTCCCCATCTCCCTCACCATGATCCACATGTCCTTCTGCGCCACCCTCGCCGTCCTCCTCGTCCGCGTCTTCCGCCTCGTNGAGCCAGTTTCAATGTCACGCGAGGTATACCTCTCCTCGGTCGTCCCCATCGGAGCCCTCTACTCCCTCTCCCTCTGGCTCTCCAACTCCGCCTACATCTACCTCTCCGTCTCCTTCATCCAGATGTTGAAGGCTCTAATGCCTGTCGCTGTATACTCCATCGGCGTCCTCCTCCGCAAAGAGTCCTACAAAAATGACACCATGCTCAACATGCTCTCCATCTCCCTCGGAGTAGGCGTCGCCGCTTACGGGGAAGCGCGTTTCGACGCCTGGGGCGTCCTCCTCCAACTGGGNGCGGTNGCCTTCGAGGCCACGCGCCTCGTCATGATCCAAATCCTCCTCACCTCCAAGGGGATCTCGCTCAACCCCATCACCTCGCTCTACTACGTCGCCCCCTGCTGCCTCGTCTTCCTCTCAGTCCCCTGGATCTTCGTCGAGTACCCTGTCCTCCGAGACACCTCCACCTTCCAGTTCGATTTCGTGGTCTTCGGGACCAACTCCTTCTGCGCCTTTGCGCTCAACCTCGCAGTCTTTCTCCTCGTCGGGAAGACCTCGGCGCTGACCATGAACGTTGCTGGCGTGGTGAAGGACTGGCTCCTGATTGCCTTCTCGTGGTCGGTTATCAAGGACACCGTGACGCCGATTAATTTGTTCGGTTACGGGCTGGCGTTCCTTGGAGTGGCGTATTACAACCACTCCAAGTTGCAGGCGCTGAAGGCCAAAGAGGCGCAGAAGAAGACCGCCCAAGCCGATGAGGAAGAAGGGAGGCTGCTTGAGGAGAGAGAGGCCGACGGAATGGGCAAGAGAAACGACCAGCAGAATTAA 1050 0.5667 MGKGGSLSDGVVKKIVLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAVLLVRVFRLVEPVSMSREVYLSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLLRKESYKNDTMLNMLSISLGVGVAAYGEARFDAWGVLLQLGAVAFEATRLVMIQILLTSKGISLNPITSLYYVAPCCLVFLSVPWIFVEYPVLRDTSTFQFDFVVFGTNSFCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKLQALKAKEAQKKTAQADEEEGRLLEEREADGMGKRNDQQN* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1197 349 Pfam Triose-phosphate Transporter family 20 306 IPR004853 -
Vra5g1197 349 PANTHER SOLUTE CARRIER FAMILY 35 1 339 - -
Vra5g1197 349 MobiDBLite consensus disorder prediction 321 349 - -
Vra5g1197 349 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 1 339 - -
Vra5g1197 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 64 160 - -
Vra5g1197 349 Coils Coil 315 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1197 Vra-Chr5 18378201 18379520 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1197 1 349 Organic Solute Cotransporters AT4G32390 84.286 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1197 - - gmx:100809504 605.905