Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1190 ATGGCTCAGAACAGTGTTGTGAACGGAATTAGGGCGATGCTGGAGGGGGCAGAGGCTGCCGTAACTGAGGAGTGTTGCATCTACAGAGTGCCCTCTGATATCCGCAAACTCAACGAAGAGGCGTACACCCCAAAGGTTGTTTCTATAGGCCCTTTTCACCACAATAGCCCTCACCTCCAGAACATGGAAAGACACAAACTCATTTACTGCAAGGCTTTTCTTGAACGATACCAAATAAGTTTGGAGAGCTGGATCCACTACATAGAAAGGGTGGAGCCCGAATTTCGAAGTTGTTACTCAGAGACCCTTCACTTCACCAAGGAGGAACTGGTGAGGATCATCTTTGTGGATTGTGGTTTTATATTTGAGCTGTTTTGGTGTATCTTTTATGAAGAATGGTTGGGGAAGAATATCAGCTTTCTCATGAAACATTTGTTAGCTACTAATATAAGATTAGATCTGTTGCTGCTTGAGAACCAACTTCCCTTTTTTGTTCTTGAAAACCTCTTCAATCTCTCCTGCCCCTCTGCACCTGCCGCTGCTCCTAACAGAAAGATCCCTTCATTTCTTGAGTTAACCTTTGACTATTTTATCTATTACAATAGATCCAAATTGACATCTCAAAATATTCGCATAATGCACTTCACGGATCTCATCAGAATATTTCACTTGCAATACCCTTTGCAACACCCTTTGCAACACCGGGTTCAGACTGATGAAACAATAATACATCTTCCTAGTGCTACTGAGTTGTCAGAGGCAGGTGTGGAGTTTAAGGTGAACACGCAAAGTGACTGCTTACTAGACTTGAAATTTTCTGGACGGGTTCTTCAAATACCGCAGTTGAAAGTGGAAGATTGGACTGAACGTTTGTTCCGCAATATGGTGGCTTTGGAGCAGTGTTACTATCCTGAACAATCCTATATTACAGATTATGTTGCTATATTAGACTTCCTTGTAAACACCAGCAGAGATGTGGATTTACTTGTTCGAAAGAGAGTGCTGGTGAACTGGCTAGGGGAGAGTGATTCTGTGGCTAGCATGTTTAATGGTCTTTGGAAAAACATCACACATATAAATTTCAATTACCAGTACTTTCTTCTCTGCAAAGACTTGAATGCTTTTTGTAGAAACCCTTTTAATAAAATGAAGTCCACTCTGAGGCGAGATTATTGTAACACTCCTTGGCAAACTGCTGTTTCCATTGCTGGAATTGTTCTCCTTTTTCTCTCTTTAGTTGAAGCAGTTTGTTCTATCTTGCAAACAGTTCGGCCATAG 1278 0.4155 MAQNSVVNGIRAMLEGAEAAVTEECCIYRVPSDIRKLNEEAYTPKVVSIGPFHHNSPHLQNMERHKLIYCKAFLERYQISLESWIHYIERVEPEFRSCYSETLHFTKEELVRIIFVDCGFIFELFWCIFYEEWLGKNISFLMKHLLATNIRLDLLLLENQLPFFVLENLFNLSCPSAPAAAPNRKIPSFLELTFDYFIYYNRSKLTSQNIRIMHFTDLIRIFHLQYPLQHPLQHRVQTDETIIHLPSATELSEAGVEFKVNTQSDCLLDLKFSGRVLQIPQLKVEDWTERLFRNMVALEQCYYPEQSYITDYVAILDFLVNTSRDVDLLVRKRVLVNWLGESDSVASMFNGLWKNITHINFNYQYFLLCKDLNAFCRNPFNKMKSTLRRDYCNTPWQTAVSIAGIVLLFLSLVEAVCSILQTVRP* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1190 425 Pfam Plant protein of unknown function 27 410 IPR004158 -
Vra5g1190 425 PANTHER UPF0481 PLANT-LIKE PROTEIN 5 424 - -
Vra5g1190 425 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 5 424 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1190 Vra-Chr5 18304703 18308605 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1190 - - gmx:100785283 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1190 5 18304703 18308605 Vra5g1190 5 18304703 18308605 ECH