Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1187 ATGATGAACATGGATGATGTTGTGATCCATGTTCAAGGAATGCTGGAGAGAGCAAACCCACCGGTAACTGAAGAGTGCTGCATCTACAGAGTACCCTTACTGATTCGCCAACTCAACGAAGAAGCTTACACCCCAAAGGTTATTTCCATAGGCCCTTATCACCATAAGAATTCCCTTCTTCAGAACATGGAAAGACACAAACTAACCTATTGCAACTCATTTCTTAAACGAACCAACACAAGTATGGCAAGCTGGATCCACTACATAGCTGGTAAGGAGCTCCAAATTCGTCAATGCTATTCAGACGCACTTGAGTTCAGCCCCAAGGAACTGGTAGAGATAATCTGTGTGGATTCTGGATTTATACTTGAACACTTTTGGACAGCTCACTATAAGACATTATACGATAAGTATCTTTCAACACCATGGTTTGGAATTATGATATTCTATGATTTGGTGTTGCTTGAAAACCAACTTCCTTTTTTTGTTCTTAATGATCTCTTCAATCTGTCCACTGTTGATGGTGATAGTGACACCCCTTCATTCATCCAACTTACATTTGAATACTTTGACTTTTTCAATAGATTAGATTTGTCTCCTGATAATCTTAACACCACATGTCATCACTTCACGGATCTAATACGAACTTTTCACTTATGTGGAAGAAATAAAACTACTAGGAGTAGCCAATGGCCGCATATTCCTAGTGCTACTAAGTTGTCAGGAGCAGGAATAAGGTTGGGAAGCAGCGAAAGTAAGTGCTTTCTAAACTTGAGTTTCTCAAAAAAGGTTCTTAAAATACCAAACTTGAGAGTGGACGATGGTACTGAACTTTTGTTTCGCAATATGGTTGCTTTGGAGCAGTTTCACTATCCTGACTATGCCTACATAGCAGAGTATGCTCTTGTTCTGCAATATCTAGTAAACACAGGTAAGGATGTGGATATACTGGTTAAAGCAGGAATAATGAAGAACTTATTAGGAGATAGTGATTCTGCTGCTGAAAGAACTAAACGTCTTTGCAGAAATACTGTTCTCAAAGATTTCAGTTCTGATTACGTCACTCTATGGCAGGAATTGGATGCTTCATATAAAAGTCGTCGTCTTAAGTTGAAGTCAACTCTTAGACGTGATTACTGTAAAGGTCCTTGGCAAACCGCTGCTACCGCTGCTGCTATTGTTGTTCTTATTCTTTCTTTTGTTCAAACAATTTGTTCTATCTGGCAGATAAAACAGTCTTAG 1242 0.3897 MMNMDDVVIHVQGMLERANPPVTEECCIYRVPLLIRQLNEEAYTPKVISIGPYHHKNSLLQNMERHKLTYCNSFLKRTNTSMASWIHYIAGKELQIRQCYSDALEFSPKELVEIICVDSGFILEHFWTAHYKTLYDKYLSTPWFGIMIFYDLVLLENQLPFFVLNDLFNLSTVDGDSDTPSFIQLTFEYFDFFNRLDLSPDNLNTTCHHFTDLIRTFHLCGRNKTTRSSQWPHIPSATKLSGAGIRLGSSESKCFLNLSFSKKVLKIPNLRVDDGTELLFRNMVALEQFHYPDYAYIAEYALVLQYLVNTGKDVDILVKAGIMKNLLGDSDSAAERTKRLCRNTVLKDFSSDYVTLWQELDASYKSRRLKLKSTLRRDYCKGPWQTAATAAAIVVLILSFVQTICSIWQIKQS* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1187 413 Pfam Plant protein of unknown function 28 398 IPR004158 -
Vra5g1187 413 PANTHER UPF0481 PLANT-LIKE PROTEIN 6 412 - -
Vra5g1187 413 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 6 412 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1187 Vra-Chr5 18266577 18267919 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1187 - - vun:114164386 701.049