Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1163 ATGACGATTTCATGTTTTGATTTTTGGAATGGTGGAATGATAGTAGAGGAAGGAAGTGAGGAGTGGAAAGAGATGAGCATGAAAGTGAAAGAAGCATGTGAGAGTGATGGTTTCTTTCTCTTGAGGTGTGATGAGATCAATTCCAAAGGTGCACGCAAAGAGCTGTTTAAGAATATGAAAGCATTGTTTCATTTGCCTCAAGAAGCGAAGCAACAACACATCAGTCCAAAGCCTTTTAGGAGTTTCAGCTTGTATAACTACATGAACACTCACTATGAAAGCTTTGGACTCGATGATGTTCTTCTCTCAACATCTGTGGACACCTTAGCCAACCTCATGTGGCCTCAAGGAAACCCACATTTTTGTGTGGCATTGAAGGGTATGAGTTTAAAGATGTCAGAAGTAAGCTGGGTGATATTGAAAATGATTGTGGAGGGTTATGGTCTTTCCCAGCATCACATTTCAGATGTTGAAAACATGAAGAGTTCAAGTGACGTACGATTGAACATGTACATTACCGATGCTGAAAACAAGTCTACGTCCAATGGTCACACTGATAAAAACAGCTTAACCATTTTGTGCGAAAATGAAGTTCAGGGTTTGCAGGTGCTATCCAAAACAGGCACATGGATTGACATAGTGATACCTGAGAATTGCTTTATGGTTATTGTTGGTGATGTATTGAAGGCATGGAGCAACGGAAGGCTTCATGCAGCGACCCATAGAGTGATGATGAGTGGAGAGAAAGAGAGATACAGTTTTGGAGTATTTGTGACACCAGATGAAGAAATGAAGATTGAGGTGCCTTGTGAATTGGTAGATGATAAAATTCATCCTCTTCGCTATCGTCCATTTCATTATGGAGATTTTTTCAATTTTTCTGCTTCAAATCACATAAAGGAAAATGCCCTTGAGATGTTTGCTGGTTTTTGA 933 0.3987 MTISCFDFWNGGMIVEEGSEEWKEMSMKVKEACESDGFFLLRCDEINSKGARKELFKNMKALFHLPQEAKQQHISPKPFRSFSLYNYMNTHYESFGLDDVLLSTSVDTLANLMWPQGNPHFCVALKGMSLKMSEVSWVILKMIVEGYGLSQHHISDVENMKSSSDVRLNMYITDAENKSTSNGHTDKNSLTILCENEVQGLQVLSKTGTWIDIVIPENCFMVIVGDVLKAWSNGRLHAATHRVMMSGEKERYSFGVFVTPDEEMKIEVPCELVDDKIHPLRYRPFHYGDFFNFSASNHIKENALEMFAGF* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1163 310 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 2 309 - -
Vra5g1163 310 SUPERFAMILY Clavaminate synthase-like 16 298 - -
Vra5g1163 310 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE AOP1-RELATED 2 309 - -
Vra5g1163 310 Pfam 2OG-Fe(II) oxygenase superfamily 173 260 IPR044861 -
Vra5g1163 310 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 162 260 IPR005123 -
Vra5g1163 310 Pfam non-haem dioxygenase in morphine synthesis N-terminal 19 86 IPR026992 -
Vra5g1163 310 Gene3D - 12 308 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1163 Vra-Chr5 18071104 18072224 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1163 184 283 Glycosyltransferase AT5G59530 27.451 4.79e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1163 - - gmx:100817159 380.948