Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1161 ATGACGATTTCATGTTTTGATTTTTGGAAGGGTGGAATTGCAGTAGAGGAAGGGAGTGAGGAGTGGAAAGAGATGAGCATGAAAGTGAAAGAAGCATGTGAGAGTGATGGTTGCTTCCTCTTGAGGTGTGATGAGATCAATTCCAAAGGTGCACGCGAAGAGCTGTTTAAGAATATGAAAGCATTGTTTCATTTGCCTCAAGAAACAAAGCAACAATACATCAGTCCAAGGCCTTTTAGGAGCTTCAGCTTGTATAACTACATGGACACTCACTATGAAAGCTTTGGACTCGATGATGTTCTTCTCTCAACATCTGTGGACACCTTGACCAACCTCATGTGGCCTCAAGGAAACCCACATTTTTGTGAGACATTGAAGGGTATGGGCTTAAAGATGTCAGACTTAAGCTTGGTGATCTTGAAAATGATTGTGGATGGTTATGGCCTTTCCCATCATCACATTTTAGAGGTTGAAAACATGAAGAGTTCTAGCGACGTACGATTGAACATGTACTATACTGAAAAAAGCAATGTTGAAAACAAGTATAAGTCCAATGGTCACATTGATAAAAACACCTTAACCATTTTGTGGGAAAATGAAGTTCAGGGTTTGCAGGTGCTATCCAAAACAGGCACATGGATTGACATACTGATACCTGATAATTGCTTTGTGGTTATTGTTGGTGATGCATTGAAGGCATGGAGCAACGGAAGGCTTCATGCAGCTACCCATAGAGTGATAATGAGTGGAGAGAAAGAGAGATACACTTTTGGAGTTTTTGTGGCACCAAAAGAAGAGATGAAGATTGAGGTGCCTCGTGATTTGGTTGATGACAAAATTCATCCTCTTCATTATCGTCCATTCCATTATGGAGAGTTTCTCAATTTCTTTGCTTCAACTCGTAGTCAGAACATGGAAAATGCACTTGAGGTGTTTGCTGGTTTTTGA 948 0.4051 MTISCFDFWKGGIAVEEGSEEWKEMSMKVKEACESDGCFLLRCDEINSKGAREELFKNMKALFHLPQETKQQYISPRPFRSFSLYNYMDTHYESFGLDDVLLSTSVDTLTNLMWPQGNPHFCETLKGMGLKMSDLSLVILKMIVDGYGLSHHHILEVENMKSSSDVRLNMYYTEKSNVENKYKSNGHIDKNTLTILWENEVQGLQVLSKTGTWIDILIPDNCFVVIVGDALKAWSNGRLHAATHRVIMSGEKERYTFGVFVAPKEEMKIEVPRDLVDDKIHPLHYRPFHYGEFLNFFASTRSQNMENALEVFAGF* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1161 315 Pfam 2OG-Fe(II) oxygenase superfamily 166 261 IPR044861 -
Vra5g1161 315 Gene3D - 12 313 IPR027443 -
Vra5g1161 315 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE AOP1-RELATED 2 314 - -
Vra5g1161 315 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 2 314 - -
Vra5g1161 315 Pfam non-haem dioxygenase in morphine synthesis N-terminal 19 84 IPR026992 -
Vra5g1161 315 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 162 263 IPR005123 -
Vra5g1161 315 SUPERFAMILY Clavaminate synthase-like 17 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1161 Vra-Chr5 18045692 18047007 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1161 130 286 Glycosyltransferase AT5G59530 24.375 2.47e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1161 - - gmx:100817159 381.333