Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1159 ATGGAAAGTGAGAATATGGCGATTCCATGGTTTGATTTCTGCAAGGGTGGGATGAGATTGGAAGAAGGAAGTGAGGAGTGGAAAGAAATGAGCAAGAAGGTGAGAGAAGCGTGTGAGAATCACGGTTGCTTCATCTTAAAGTGTGATGAGATCATCCCCAAGAGTGTTTGTGAAGAAATGTTTCATCACATGAAAGCTTTGTTTGATTTGCCTGAAGAAACGAAACAGAAATACGTAACTCCAAGGCCTTATAGGAACTACAATGGCAAGAACTCTGTCATTCCCCTCTGTGAAAGCTTTGGCATTGATGATATTCCTCTCTCAGATAAGGCTGAAGCCTTCACTAACCTGATGTGGCCACAAGGAAACCCACCTTTCTGTGAGACACTAAAGACAATGAGCTTGAAGATGGTAGAGCTAAGTTTCCTTGTATTGAAAATGGTAGTGGAAGGTTATGGTCTTCCCGAACATTACATTTCAGATGCTGAAAACATGAAAAAGTCTAGCTATTCACGATTGATCAAGTACAAAGTTTCTGAAAGCAACAATGAATGTGAAACTTGTCTTCCACCTCACACAGACAGCAGTTCTTTAACGATTTTATGCCAGAAAGATGTTCAAGGACTTCATGTATTATCCAAAACAGAGAAATGGATTGAATTAGAGATACCCCATGATGGATTTGTGGTCCTTGTTGGTGATATACTAAAGGCATGGAGCAATGGGAGACTTCATGCAGTGACACACAGAGTGGCGTTGAGAGGAGTGAAAGAGAGATACTCATTTGGACTTTTTGCAAACCCAAAGGAAGAGATGAAAATCGAGGTTCCCGATGAGTTGGTGGACAATCAGATTCATCCCTTACGTTATCGTCCATTCAATTATGGTGAGTATTTCAACTACTTTGTTTCAAATCCCATGGAAGCTCTTGAAGTCTTCTCAAGTATTTGA 951 0.4059 MESENMAIPWFDFCKGGMRLEEGSEEWKEMSKKVREACENHGCFILKCDEIIPKSVCEEMFHHMKALFDLPEETKQKYVTPRPYRNYNGKNSVIPLCESFGIDDIPLSDKAEAFTNLMWPQGNPPFCETLKTMSLKMVELSFLVLKMVVEGYGLPEHYISDAENMKKSSYSRLIKYKVSESNNECETCLPPHTDSSSLTILCQKDVQGLHVLSKTEKWIELEIPHDGFVVLVGDILKAWSNGRLHAVTHRVALRGVKERYSFGLFANPKEEMKIEVPDELVDNQIHPLRYRPFNYGEYFNYFVSNPMEALEVFSSI* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1159 316 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE AOP1-RELATED 2 314 - -
Vra5g1159 316 SUPERFAMILY Clavaminate synthase-like 5 305 - -
Vra5g1159 316 Pfam non-haem dioxygenase in morphine synthesis N-terminal 22 90 IPR026992 -
Vra5g1159 316 Pfam 2OG-Fe(II) oxygenase superfamily 177 267 IPR044861 -
Vra5g1159 316 Gene3D - 7 314 IPR027443 -
Vra5g1159 316 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 167 268 IPR005123 -
Vra5g1159 316 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 2 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1159 Vra-Chr5 18032379 18033617 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1159 5 298 Glycosyltransferase AT5G59530 24.262 2.16e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1159 - - gmx:100790408 506.523