Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1158 ATGGACGACGAAGACTCAAACTCAAGCACCATCCAGAAGATTCTAGATCTTCTCTACGCCGCGGGCTTCGTCCACGCGACAGACTCCGATGCGCCACCGTCTGAAAAAGTCGCAGCCGGCCTCTCTTGGTGCATCGCCGCCATAACAGACCAGGACAAAACACTCGGCATTGAGGAATCTTTAGAATTAGTTGGATGCCCTCACCGTCTTCGACTCTCTCATGTCCAAGATCTTGATGCCGACGCTCTTTTTCCTGTAATTCAGTGGCTTACGTCACACCTTCCACAAAATCAAGAACACCGTGCCAGTGAGGTTTCTCATGCTGAAAATACCGTTGCAGTGGATGAGTGCAGGACTTCGATTGAGGCATTGAGTGGCAACTTGGATAAACTGAATCAGCAGAAGATGAACGTTGTGAAGCAATTAACTACTCTACAAGAGAGAATCAGTAATGAGGGTGCTGATTCTGCGGCACAGAAGTTAATTTCTTTAATGACGTCTTTGAAGGATCTTGAAAAGCAGGAAAATTACTTTCAGCAGTATCGTGATTCTAAACACTCAGAACTTCAAGCTGATATTAGTGAATTAGAGAGGCAAATTACAAATTACAGTGATAACAAGAATCTATCTGATGGACTACATAATTCTTTTAGTGAATTAGTTGAAACAGTCGATTTGATGAAAAAGAAACTTGCTGCTAGATTGAGGAATACTGTAGCACTAAGACGTCAGATTGATGACCTACCATGCCAATCAGAAGTCATCCAGTATGAGTCTCGGCTCTCCGAACTGTATATGCAAATCCAGGGAAAACATCGACAAACTCACAAGTACTATGCTACCTACAATGCACTCTTGGAAATAAAAGAACTGATGTTAAAGGAAGCATCTTTGTTGAATTCGATCATTTCTCAGTTTCAAGAGGCCTTTAGTAGCACCGATGGGCGTATAAAACTAGTTCATTCCATGGAAGGAATTGTCAAGGGAAGTCAACAGAAGCTAGAAAAGGTTCGTGTAGGACTTCAAGAAGAAGAAAGAATCCGCAATGATCTAAAGGGTAGGTATGCTGCAGCAGTCGGTGAGAGGAAGCGCTGCTATTACCTGTCGAAAGCTTTTCAGGCCCAATGTGCGAAGAAGGAGAGTGAAAACTGCCCACAAGACAAATGA 1167 0.4327 MDDEDSNSSTIQKILDLLYAAGFVHATDSDAPPSEKVAAGLSWCIAAITDQDKTLGIEESLELVGCPHRLRLSHVQDLDADALFPVIQWLTSHLPQNQEHRASEVSHAENTVAVDECRTSIEALSGNLDKLNQQKMNVVKQLTTLQERISNEGADSAAQKLISLMTSLKDLEKQENYFQQYRDSKHSELQADISELERQITNYSDNKNLSDGLHNSFSELVETVDLMKKKLAARLRNTVALRRQIDDLPCQSEVIQYESRLSELYMQIQGKHRQTHKYYATYNALLEIKELMLKEASLLNSIISQFQEAFSSTDGRIKLVHSMEGIVKGSQQKLEKVRVGLQEEERIRNDLKGRYAAAVGERKRCYYLSKAFQAQCAKKESENCPQDK* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1158 388 Coils Coil 114 148 - -
Vra5g1158 388 PANTHER FIDIPIDINE 3 103 IPR039116 -
Vra5g1158 388 PANTHER FIDIPIDINE 106 380 IPR039116 -
Vra5g1158 388 PANTHER COILED-COIL DOMAIN-CONTAINING PROTEIN 93 106 380 - -
Vra5g1158 388 PANTHER COILED-COIL DOMAIN-CONTAINING PROTEIN 93 3 103 - -
Vra5g1158 388 Coils Coil 154 174 - -
Vra5g1158 388 Coils Coil 186 206 - -
Vra5g1158 388 Pfam CCDC93, coiled-coil domain 57 148 IPR019159 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1158 - - gmx:100806690 591.267