Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1136 ATGCCGAGAATGGAGGACATTCTGAACCTTCCTGTGCAAGATCCTCTTTGTAAAGAGTTTTCTGCTGCTCACATAAATTGGGTTAGATTGGAAGGTGGTCGCCAAGGTGGTGATGATATTGCTCTCATTCCTTTTGCCAGAGTTGATGATTTTGTCAAAGGGGAATCTTTCAATCCCGAATGCCCTGCGAGTTTTCGCATAGAATCAAGGAGGAAGAGACCTGAAGGAAGTATTGCCAAACCAAGGGTTGATGGTTACCTTGAATACACTCTATACTGGTGTTCTTATGGTCCCGAAGACTACCGAGATAGCGACTCAGGTGTAGGGGATGGTATGAGCTCCAAGCCTGCCTCAGGGAAGGGGAGCAGGCCGGGGAGGCGTCACATGATGAGAGGGTGCCTTTGCCATTTCACTATTAAAAGACTTTACACCAGGCCTCTCCTTGCACTAATCATATATAACCAAAAAAGGCACGTAGATAAATCAGGGGCACCATGTCATGGATTGCTTGACAGGGATGCCGTGGGGACGAGAGCCATGTATGCTCCACGAATTTCAGATGAGTTGCGCCAGAAAGTGACGTCTTTGCTTTATGTTGGAATATCTTTGGACAAGATAATACAGCACCATACAGAGGAGATGCAGAAGCAAGGTGGGCCCCAAAACCGTGATGGTTTTCTCACTCGAAATGATGTACGTAACATGGAAAGGACTATTCGTAATTCTTCACATGAGCTACACGAAAATGATGAACACAGTGTAAAGATGTGGGTTCAGAGGCATCAGAAGCATGTTTTCTATTTTCAAGATAACTCAGCTTCAGAACAATTTGTGTTGGGTATACAAACAGATTGGCAGCTGCAACAAATGCTCCGTTATGGAAATAATGGTTTAATTTCGTTTCATTCAGGATTTGGCTTGAAAAAGCTCAAGTATCCTGTATGTTCTTTACTTGTTTTCAATTCATCCCAAAATGCAATTCCGGTTGCCTGGATCATCACCTCATCTTTTGTTGGTAAATCTATTCATAAGTGGATTGTATTGCTATCTGAAAGATTAAGAACGAAGGATCCCAGATGGAGGCCAAATGCTATTTTGTTAGATGATCCATCTTTGCAATTTTCTATCATAAGAGAAGCTTTCCAGTGCCGCGTCCTATTATGTGCCTGGCATGTTCGCCGTACTTTGATTAAAAAACTCATCAAAAAATGCTGCAACTTCGAGGTGCAACGTGAGATGTTTATGTATTTGGGATGGATTCTGTACTGTACAAAATGTGGGTCAAATGCTATGGATTCTGTTGAAGAGTTTATTCAAATTTTTGTTGACCAGTGTGCCTTTATGGACTATTTCAAAAACCATTGGCAAACTAGAATAGATATGTGGATTGATGCAATAAAATCATTCCCGGTGACAACCCCTGAGACCCATGCTGCTACAGAATCCTATCACCTAACATTAAAATCTATACTTCTGAAGGAGGATTGTGGTAATTTCTGGCTAAGAGTTGACTGGTTAATGCATGCTTTAACTACCGTATTTCACTCGTTATACTGGTTGGATCAGTACAGTTTAGAGACAGGGTATTTTGAGAATGTAAACGACAATTCTTTCTCCCCTAATGCTTGGAATCGTGCTCTTCATATTCCTGATGTTGACGTGATGCTGGATGAGCAAAATCTCCATCTTGCCAAAGTTTTATCCCAGACTGACAGAAGCTTGGTATATACAGTTTGGAATCCTGGTTCAGAATTTTCACTTTGTGATTGTTCCTGGTCTAGGTTGGGAAACCTCTGTAAACATGTCATCAAAGTGGCAAATTTCTGTAGATATCGGCAGGTTGCAAAACCATCATTGTCTGCTCAAGTTTATAAACAGAATTTGCTCACTCTTCTCCAAAATCCTCCTGATGATCCTTTAGTTCTGGACCATACCGTTCTACATGTGGCCCGTTTGCAACAAGACATTAAGGCCTTGGAAGACTTGTCCAACAGTGGATTGCTCCAGCCTATATCTCTTGATTTAAGTTCTCAAATGGCTGAAAATCCTCTGCTTTTTCAACAATCCAGTGACTGGCCCATATTGAAAATAGATTGA 2097 0.4154 MPRMEDILNLPVQDPLCKEFSAAHINWVRLEGGRQGGDDIALIPFARVDDFVKGESFNPECPASFRIESRRKRPEGSIAKPRVDGYLEYTLYWCSYGPEDYRDSDSGVGDGMSSKPASGKGSRPGRRHMMRGCLCHFTIKRLYTRPLLALIIYNQKRHVDKSGAPCHGLLDRDAVGTRAMYAPRISDELRQKVTSLLYVGISLDKIIQHHTEEMQKQGGPQNRDGFLTRNDVRNMERTIRNSSHELHENDEHSVKMWVQRHQKHVFYFQDNSASEQFVLGIQTDWQLQQMLRYGNNGLISFHSGFGLKKLKYPVCSLLVFNSSQNAIPVAWIITSSFVGKSIHKWIVLLSERLRTKDPRWRPNAILLDDPSLQFSIIREAFQCRVLLCAWHVRRTLIKKLIKKCCNFEVQREMFMYLGWILYCTKCGSNAMDSVEEFIQIFVDQCAFMDYFKNHWQTRIDMWIDAIKSFPVTTPETHAATESYHLTLKSILLKEDCGNFWLRVDWLMHALTTVFHSLYWLDQYSLETGYFENVNDNSFSPNAWNRALHIPDVDVMLDEQNLHLAKVLSQTDRSLVYTVWNPGSEFSLCDCSWSRLGNLCKHVIKVANFCRYRQVAKPSLSAQVYKQNLLTLLQNPPDDPLVLDHTVLHVARLQQDIKALEDLSNSGLLQPISLDLSSQMAENPLLFQQSSDWPILKID* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1136 698 PANTHER ZINC ION-BINDING PROTEIN 1 688 - -
Vra5g1136 698 PANTHER ZINC ION BINDING PROTEIN 1 688 - -
Vra5g1136 698 MobiDBLite consensus disorder prediction 105 126 - -
Vra5g1136 698 ProSiteProfiles Zinc finger SWIM-type profile. 576 610 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1136 Vra-Chr5 17842696 17847758 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1136 - - pvu:PHAVU_009G098900g 1291.95