Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1121 ATGGGTTTCGCAAAATCTTCTCTTCTGGCAGTGGCTCTTCTTCTGGCCGTCTGCAGAAGCATCCAAGCCTTGGATGTGCTGGAGGCGCTCAACAATCCTCAGTATGAGCAGTTCAACAAAGCCCTAACCGAGGCCAATCTGGTTGACAAAATAAACGCCCTTAAAGCCGTCACCGTTCTCCCCTTGTGCAACGACGCCATGGCTTCCCTCGCCGGGAAGTCACCGGAATTTCTGAAGGCCACCATCAGCACGCACGTCCTTATCGGCTACTACGACGAGAAGAAGCTGGTGGAAAACATTGGAAGCCAAACTCCCATCGAGACTCTCTTCCAATCCTCCGGCCTCGCCAAGGACAAACAGGGATACGTCCTCGTCCAGCTCGTCAACGAAGGCGAGGTTGTCTTCGGATCCGCCGCCTCTCCTTCCGGCACAGTCTTCACCGTCGGCCTTGTGCAAACCGTGGCCAAACAACCCGAAGAGTTTTCCGCTCTTGAGGTCACCAAGCCCATCCTTGTACCTGGAATTGAGAATTTGTCCTCCGACGTCAAGGTTCCTCTTGCCACCACGGGAGGTAGCATGGCAGCGTCTCCTTCGGCTCTCGCTCCCGCTCCCGGTAGCAGCGACGCTTCACGCCTCTGCATGGGGCTCCTCGCTGCCGCTTCAGCTTCCGCCGCTTTCATCCTTGCCCTGTAA 693 0.5657 MGFAKSSLLAVALLLAVCRSIQALDVLEALNNPQYEQFNKALTEANLVDKINALKAVTVLPLCNDAMASLAGKSPEFLKATISTHVLIGYYDEKKLVENIGSQTPIETLFQSSGLAKDKQGYVLVQLVNEGEVVFGSAASPSGTVFTVGLVQTVAKQPEEFSALEVTKPILVPGIENLSSDVKVPLATTGGSMAASPSALAPAPGSSDASRLCMGLLAAASASAAFILAL* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1121 230 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 1 201 - -
Vra5g1121 230 SUPERFAMILY FAS1 domain 30 122 IPR036378 -
Vra5g1121 230 ProSiteProfiles FAS1/BIgH3 domain profile. 22 152 IPR000782 -
Vra5g1121 230 Gene3D FAS1 domain 24 156 IPR036378 -
Vra5g1121 230 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 201 IPR033254 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1121 Vra-Chr5 17669734 17670639 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1121 - - pvu:PHAVU_009G1004000 233.417