Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1119 ATGGTAGTGCGCATGGAAGATGTTCTGTTGGATACCAGTTGGAAAGATGTAATCTGCCCTATATGCTTGGAAGTTCCTCATAATAGTGTGCTCCTTCAGTGTTCATCTTATGATAAGGGGTGCCGTCCTTTTGTATGTGACACAAGTCAATTGCACTCAAATTGTTTAGATCGTTTTAAAAGAACACAAATGTCCGATGCAAATTCCGTGGCAAATAGTGACTCAGTGGTATCTGATTGTCAATACAATTTGAGTTGTCCCTTGTGCAGAGGTGATGTTTCTGGGTGGATTGTAGTGGATAAAGCTCGTGTGCATCTTGATGAGAAGAAGCGTTGTTGTGATGAGCAGCAATGTGCATTTGTTGGAAGTTACTCCGAGCTGCAGAAACATGCTCAGCTGGAACACCCTCATGCTTGTCCATCAAAAATTGATCCTGCCAGGCAGCTTGATTGGGAAAATTTTCAGCAGTCATCCGAGATTGTAGATGTTTTGAGCACTATTCATTCAGAAGTTCCACGCGGAGTGGTTTTAGGAGATTATGTGATTGAATATGGGGATGATGATAGTGCAGATGAGTTTGAGGACTTCCCTGGAGATGAAGATTATGGCGAGTATAGGCTAGACGAGATTGATGATGATTTTGTTAGTTCTATTGGCCCTTTGAGGAGTGGCAATGGTTTTCGCAGATCACGGAGACGACATTCTCATTCCAATGACAACTAG 723 0.426 MVVRMEDVLLDTSWKDVICPICLEVPHNSVLLQCSSYDKGCRPFVCDTSQLHSNCLDRFKRTQMSDANSVANSDSVVSDCQYNLSCPLCRGDVSGWIVVDKARVHLDEKKRCCDEQQCAFVGSYSELQKHAQLEHPHACPSKIDPARQLDWENFQQSSEIVDVLSTIHSEVPRGVVLGDYVIEYGDDDSADEFEDFPGDEDYGEYRLDEIDDDFVSSIGPLRSGNGFRRSRRRHSHSNDN* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1119 240 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 105 IPR013083 -
Vra5g1119 240 PANTHER OS01G0612600 PROTEIN 1 201 - -
Vra5g1119 240 MobiDBLite consensus disorder prediction 217 240 - -
Vra5g1119 240 Pfam Protein of unknown function (DUF1644) 16 165 IPR012866 -
Vra5g1119 240 PANTHER OS02G0150900 PROTEIN 1 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1119 Vra-Chr5 17640601 17644278 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1119 - - vra:106759954 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1497 6 29754185 29766068 Vra5g1119 5 17640601 17644278 PCT