Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1111 ATGAAATGTTATATATTAGGAGTGATCGATATGGGCCCACAAACGGCATGGCCCCACTTCCACTGCAGTTCCCATCATCTATCATCTATCATCTATCATCCATCATCCCAACTCAATCATTCACACTTTTATTTCTTCTCTCCTTTATCATCTCTTCTCTCTTCTCTTTGCTGTTCTTCATTTCATCGTTGCGAACCAAACATCATGGTTTACTTCGAAGGAGAAAAGGAACACAGAGACCTTATTCCGGGTTTGCCCAACGAAGTTGCAGAGCTATGTCTTCTTCACGTTCCCTACCCTTACCAGGCTCTCTCGCGCTCTGTTTCTTCCACCTGGAACAGAGCAATTACCAATCCCTCTTTTATCTTCTCAAAGAAAACGCTTTCCCACCCCAACCTTTTCGTTCTCGCCTTCCATTCCCAAACCGGTAAGCTTCAGTGGCAGGCGCTTGATCCTTCCTCTGCCCGTTGGTTCCTTCTTCCTCAAATGCCCTCGCCGGAGGACACCATGCCGCTTGCCTGCGCCGCCTTGCCACGCCAGGGGAAGCTCTTCGTCGTCAACGGCACAAAAACGCTGACCTACCGCGCCGCCACGAATCAGTGGTCGGTGGCTGGGGGACCCGGGAGGAGGGAGTTCGTGGCTGCCGAAGGAGTGGAGGGAAGGATAGTGGCGGTGGGGAGAGGCGGCACCAGCGTGTACGATCCCGAGAGCAACAGATGGCAGGAGGGGAGTGAGTTGGAAGGGGAGTTGGAGAGGTACGAGGTTGTGGCGGCAGGGGGAAGGGTATACGTGACGGAGGGGTGGTGGTGGCCGTTCATGTTCCGGCCTAGGGGCTGGGTTTACGAGATGGAGAGGGACACGTGGCAGGAGATGGGCATAGGAATGAGAGAAGGGTGGAGTGGGGTGGGTGTGGCGGTTGGCGGAAGAGTTTTTATGATTGCCGAGTATGGAGATTCGCCGGTGAAGGTGTACGACGAGGAGCATGACACATGGTGTCCTGTGGCAGGTGGTAGATTTCCAAGAGAAGTTATGAAGAAGCCTTTTTGTGCCACGGGGTTGGATGACAGAATCTACGTGGCATCTTGTGGTTTGAACGTGGCGATAGGAATTGTTGAGAGGGTTTCGAACATGGAACAAGATGTCAAAGGTTGTACTGCTGACGTGTGTGTGACGTGGCAGGTGGTAGAGGCTCCGCGTGCATTTCGGGAATTCTCACCTTGTAGCTGCCAAGTGATGTATGCATGA 1245 0.5301 MKCYILGVIDMGPQTAWPHFHCSSHHLSSIIYHPSSQLNHSHFYFFSPLSSLLSSLCCSSFHRCEPNIMVYFEGEKEHRDLIPGLPNEVAELCLLHVPYPYQALSRSVSSTWNRAITNPSFIFSKKTLSHPNLFVLAFHSQTGKLQWQALDPSSARWFLLPQMPSPEDTMPLACAALPRQGKLFVVNGTKTLTYRAATNQWSVAGGPGRREFVAAEGVEGRIVAVGRGGTSVYDPESNRWQEGSELEGELERYEVVAAGGRVYVTEGWWWPFMFRPRGWVYEMERDTWQEMGIGMREGWSGVGVAVGGRVFMIAEYGDSPVKVYDEEHDTWCPVAGGRFPREVMKKPFCATGLDDRIYVASCGLNVAIGIVERVSNMEQDVKGCTADVCVTWQVVEAPRAFREFSPCSCQVMYA* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1111 414 SMART fbox_2 85 125 IPR001810 GO:0005515
Vra5g1111 414 SUPERFAMILY F-box domain 78 161 IPR036047 GO:0005515
Vra5g1111 414 SUPERFAMILY Kelch motif 133 361 IPR015915 GO:0005515
Vra5g1111 414 Gene3D - 123 400 IPR015915 GO:0005515
Vra5g1111 414 PANTHER F-BOX PROTEIN AFR 74 414 - -
Vra5g1111 414 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 74 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1111 Vra-Chr5 17548693 17550245 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1111 - - vra:106761094 853.973