Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1103 ATGGAGATCCGTGCCGATGCAGAAACCAGCTCCTTCTCAAGTTTGTTCGCGGCTGTGGCATATGGGTTTGCCTCCATGGCCATGGTTTTTATCAACAAGGCTGTTCTTATGCAGTATGCATATTCAATGACTCTTCTCACTTTGCAGCAATTGGCTACCTCTTTGCTTATCCATGTTGGTAGACGTGCGGGATTCACAAAGGCGAGAGGACTGGAAATGACAACGGCCAAGCGACTTCTTCCGCTTTCAATTTTCTATAATGCCAATGTTGCTTTTGCTTTGGCCAGTTTGAAAGGAGTCAATATCCCAATGTATATTGCGATCAAGAGGCTTACCCCACTTGCTGTACTTATTGCTGGGTACTTCTCGGGAAAGGGAAGACCTACATCTCAGGTGGCTCTTTCAGTTATATTGATTGGTGCTGGAGTTCTCATTGCTGCCCTCGGAGATTTTTCCTTTGACCTTTTTGGGTATGGCATGGCTTTTGTTTCGGTTTTTTTCCAGACCATGTACCTTGTGCTGGTGGAAAGATCTGGTGCTGAGGATGGACTTTCATCCTTGGAAATCATGTTCTATAACAGTTTTTTATCTCTTCCATTTTTGATGTTCCTCATCATAGCCACTGGGGAATTCCCAAAGTCTTTATCTTTATTATTTGCACAGAGTTATTCTTTTTCGTTTTTGATGGTTCTTATTCTTTCATTGGTAATGGGCATTGTTCTCAACTTCACCATGTTCTTGTGTACAATTGTTAATTCAGCCTTAACTACAACTATTGTTGGCGTTCTCAAAGGGGTTGTTTCCACGACCCTTGGTTTCTTCTTACTGGGTGGTGTTCAAGTCCATGCTTTGAATGTGACTGGATTGGTTATCAACACAGCTGGCGGTGTGTGGTATTCATTTGCCAAATATCAGCAGAAAAGAAGTAAGTCGACGAAGCTTGTACCTGATGAGGAGGCCCATCGTAAATAG 972 0.429 MEIRADAETSSFSSLFAAVAYGFASMAMVFINKAVLMQYAYSMTLLTLQQLATSLLIHVGRRAGFTKARGLEMTTAKRLLPLSIFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLIAGYFSGKGRPTSQVALSVILIGAGVLIAALGDFSFDLFGYGMAFVSVFFQTMYLVLVERSGAEDGLSSLEIMFYNSFLSLPFLMFLIIATGEFPKSLSLLFAQSYSFSFLMVLILSLVMGIVLNFTMFLCTIVNSALTTTIVGVLKGVVSTTLGFFLLGGVQVHALNVTGLVINTAGGVWYSFAKYQQKRSKSTKLVPDEEAHRK* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1103 323 Pfam Triose-phosphate Transporter family 23 300 IPR004853 -
Vra5g1103 323 PANTHER JC8.12-LIKE PROTEIN 12 305 - -
Vra5g1103 323 PANTHER SOLUTE CARRIER FAMILY 35 12 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1103 Vra-Chr5 17487386 17490533 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1103 19 322 Lipid Metabolism Gene Families AT5G19980 25.776 3.10e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1103 K15281 - gmx:100777622 557.755