Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1100 ATGAGTCTTAAAGATCACGTCAGTGTAACATTTAAAGTTCTTCTCTGTTCCAACGCTCGCTCTGTATCATCTCCTTTCGTCTTGGAGACTCAACCTCCTCGTCCTTCTTCCTATCCACTACTGTTCATCTTCAGCTCCAACTTCAAAGATATCAAGAAAGGTAAACAAAAGAGAGGACATCTGCTATATCAAGCTACAATGGCAGGGTTAAATTTTGAAGCCACATATACTGACAACCATGATATTCTGAAGATACTTGAAGCTGAAGGTGTTGAGTTCCTTTTATCTTCTGAAGGAAAGGTACCTGTGTCAGAATACAATGGGAAAGTCATCTGCCTATTTTTCAGTGCAAACTGGTGCAGGCCTTGCAGAGCTTTCACTCCCCATCTTCTTGAACTTTATGAAACACTGAGAAAGAGAGGAAAAAATCTGGAGATCATCTTCATCTCCTTTGACCGTGATGAGGATGGATTTAAAGAGCACTTCAAGAGCATGCCATGGCTAGCTGTCCCATTTGATGTAAATTTGCACAGAAGACTGATTGACAGATACAGAGTTGATCGAATCCCATCATTCATTCCATTATGTTCAGATGCCATAACTGTTGAAGAAGACTTGATTGGCTGCATTGAGGATTATGGTGCTGATGCATTTCCTTTCACTAGGAAGAGACACGAGGAACTGAAAGCCATGGATAAAAGGAAGCTTGAGGAAGCAAACTTGGAAGAATTACTAGGACATGAAGAACGCCACTTTCTTATCTCTGGAGATGATAGGAAGGTGCCAATATCTGAAGTAGTTGGCAAAACCATAGGCCTGTATTTTTGTGCCTACTGGTCTCCTCCTTGTTCTGCCTTCACTGTCCAACTTAGAGATGCATACAACAAACTCAAGGCTGCAAAAGGAGACTGCTTTGAGATTGTTTTAATATCAACAGACAGGGACCTTGATGAATTCAATGTCAACAAAAGTAGTATGCCATGGCTTGCTCTTCCATATGAGGACAGGACAAGGCATGATCTTAGAAGAATCTTCAATATAAAGGGCATTCCTGCTTTGGTTTTCATTGGAGGAGATGGCAAAGTAATCAGTGCGAATGGCAAGTTTATGGTCTCTTCATATGGGGCAGAAGCTTTTCCCTTTACCGAATCACGGATAAGAGACCTAGAAGCAGCTCTGAGAAAGGAAGGAGAGGCTCTGCCAAAGCAGGTTGAGGATGTCAAGCATGAACATGTGCTGAAATTGGATATGGCCAAAGCATATGTATGTGATTCCTGTAGAAAGCAAGGGAAGTTCTGGACATTTTCTTGTGATGTTTGTGACTATGACCTGCACCCAAGTTGTCTAGAAAAGGCCAACTAG 1362 0.4185 MSLKDHVSVTFKVLLCSNARSVSSPFVLETQPPRPSSYPLLFIFSSNFKDIKKGKQKRGHLLYQATMAGLNFEATYTDNHDILKILEAEGVEFLLSSEGKVPVSEYNGKVICLFFSANWCRPCRAFTPHLLELYETLRKRGKNLEIIFISFDRDEDGFKEHFKSMPWLAVPFDVNLHRRLIDRYRVDRIPSFIPLCSDAITVEEDLIGCIEDYGADAFPFTRKRHEELKAMDKRKLEEANLEELLGHEERHFLISGDDRKVPISEVVGKTIGLYFCAYWSPPCSAFTVQLRDAYNKLKAAKGDCFEIVLISTDRDLDEFNVNKSSMPWLALPYEDRTRHDLRRIFNIKGIPALVFIGGDGKVISANGKFMVSSYGAEAFPFTESRIRDLEAALRKEGEALPKQVEDVKHEHVLKLDMAKAYVCDSCRKQGKFWTFSCDVCDYDLHPSCLEKAN* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1100 453 SUPERFAMILY Thioredoxin-like 99 196 IPR036249 -
Vra5g1100 453 ProSiteProfiles Thioredoxin domain profile. 82 237 IPR013766 -
Vra5g1100 453 Coils Coil 222 242 - -
Vra5g1100 453 Pfam Thioredoxin-like 108 193 IPR012336 -
Vra5g1100 453 Pfam Thioredoxin-like 268 362 IPR012336 -
Vra5g1100 453 CDD TryX_like_TryX_NRX 252 381 IPR045870 GO:0004791
Vra5g1100 453 Gene3D Glutaredoxin 86 224 - -
Vra5g1100 453 Pfam C1 domain 408 448 IPR004146 -
Vra5g1100 453 PANTHER NUCLEOREDOXIN 3-RELATED 67 451 - -
Vra5g1100 453 SUPERFAMILY Cysteine-rich domain 401 449 IPR046349 -
Vra5g1100 453 PANTHER THIOREDOXIN 67 451 - -
Vra5g1100 453 SUPERFAMILY Thioredoxin-like 253 363 IPR036249 -
Vra5g1100 453 Gene3D Glutaredoxin 245 383 - -
Vra5g1100 453 ProSiteProfiles Thioredoxin domain profile. 243 391 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1100 Vra-Chr5 17466285 17468971 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1100 K17609 - gmx:100778160 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1100 5 17466285 17468971 Vra5g1100 5 17466285 17468971 ECH