Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1099 ATGGCGCGAGTATGGGTGAGCTCCACATTCCCGCGCGCACTTCATTTCGCGATTCTGCGCCACTCTAACTCCTCCCTCGTTATCTTCCCTGTAACGTCTCTTTACTCTGAGATTTACGGTTGCTGGCGAAGGGAACGATCGGTGACTGGTAGTGTTAGGGCTTTTGAATCCTCTTCTGCTAAACCTATGAGTTGGTGCGATGGCGTTCAAGAACCACGGGTTCTCGTCGCGCCGGATCCTGGCACCGATGGAAATGGTCCGGGACAGATGATACTGCTCCGCCATCCCAAATCTGGAAATGCAACGCAGTATCTGTTTGCAAATGGAATGCTTCAAGAACTTCAGTGGTTTAAGAACTTGTACGGGTCTTGGTTTTTGGGAGATTATATAACTGAAGATGGTCGGTTGTATTTATCCACACCAATTGATCCTGTTTTCATCATGTTGCCTATATTTGAGGAAGCTAGAATGAAGAAAGGGGATGATCTTGGGAGGTTCAGGCAATTGGACGAGATATTATTTATTGATGGCTATCCTGGATATATGCAGTTAATGTCTGTTGTGGAGAACTGTATGCAAGTTGTTTCTGAGATCAAAGAAGTTGGATCCTCAAAATTCTTCAGACTTGATGACTCAAAGGTTCTACGTTGGTTGTGCTATAAGGTTTGTCAGCTAAAACAGACACTACCCAATTTGGACAAAAACTATGCTGTTCAATCAGAGAAAGACACATTGATTGATGCCGTCTCTATATTAGGAGAGTATTTGAAGGAAAAGCCTTGGCTGGAGCTTTTGTGTAACCATCTAAAGTTAAATATACTTGAGGTTACTGGAAAAGTACAAGTATATGATGAAGGAAGTAACCCAGGTTCATGTAACGAATTACAGGAACAACGGAGTGAAGATAAGAAGGCCACAACTACAAAGAAAGGTAGACAAGTGAAGAAGGTAAAATTGGAGACAGAATCACACAACATCAAAGATATGTTTACGAGGGCCTCCCGAAAGAAAAGCTAA 1017 0.4287 MARVWVSSTFPRALHFAILRHSNSSLVIFPVTSLYSEIYGCWRRERSVTGSVRAFESSSAKPMSWCDGVQEPRVLVAPDPGTDGNGPGQMILLRHPKSGNATQYLFANGMLQELQWFKNLYGSWFLGDYITEDGRLYLSTPIDPVFIMLPIFEEARMKKGDDLGRFRQLDEILFIDGYPGYMQLMSVVENCMQVVSEIKEVGSSKFFRLDDSKVLRWLCYKVCQLKQTLPNLDKNYAVQSEKDTLIDAVSILGEYLKEKPWLELLCNHLKLNILEVTGKVQVYDEGSNPGSCNELQEQRSEDKKATTTKKGRQVKKVKLETESHNIKDMFTRASRKKS* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1099 338 MobiDBLite consensus disorder prediction 287 318 - -
Vra5g1099 338 Pfam Ydr279p protein family (RNase H2 complex component) wHTH domain 146 233 IPR019024 -
Vra5g1099 338 Pfam Ydr279p protein triple barrel domain 89 143 IPR041195 -
Vra5g1099 338 CDD RNase_H2-B 74 331 IPR040456 GO:0032299
Vra5g1099 338 Gene3D - 71 141 - -
Vra5g1099 338 PANTHER RIBONUCLEASE H2 SUBUNIT B 57 337 IPR040456 GO:0032299
Vra5g1099 338 MobiDBLite consensus disorder prediction 296 318 - -
Vra5g1099 338 Gene3D - 142 270 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1099 K10744 - gmx:100792495 578.941