Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1096 ATGGTTTTCTGGGTGTTTGGCTACGGTTCACTGGTGTGGAACCCTGGGTTTGATTACGATGAGAAGATTGTTGGTTTCATTAAGGATTACAGACGCGTGTTCGATTTAGCGTGCATTGATCACAGGGGAACCCCAGAAAGCCCAGCAAGAACTTGCACCTTGGAGGAGAAAGAAGGAGCTATTTGCTGGGGAACTGCTTATTGTGTTCGAGGAGGCCCTGAAAGGGAAAAATTGGCTATGCAGTATTTGGAGCGACGGGAATGTGAATATGACAGAAAAACTATTGTAACCTTCTTCAAGGAAGGAGATTCACAGCACCCTGCTTTGACTGACGTAATAGTATTTACATCAACTCCAGACAAAGTGAACAACAAATACTACCTGGGACCTGCCCCACTGGAAGACATGGCTAGGCAAATAGCAACTGCGTATGGTCCTTGCGGAAACAACAGGGATTATCTTTTCCTTCTAGAAAAGGCTATGCATGATATTGGCCATGAGGATAACTTAGTGATAGAGCTTGCGAATGAAGTGAGGAAAGTACTTGGAGTGGGAAATGTGCTAACAAATGTTGCAACAGCTCAACTTCCACACCCTCCTCATGTATCCATACCTTCCCGTCAACTGCAACCACTGCCAGAACCTATTGTTTTGGATGGGTGA 663 0.4525 MVFWVFGYGSLVWNPGFDYDEKIVGFIKDYRRVFDLACIDHRGTPESPARTCTLEEKEGAICWGTAYCVRGGPEREKLAMQYLERRECEYDRKTIVTFFKEGDSQHPALTDVIVFTSTPDKVNNKYYLGPAPLEDMARQIATAYGPCGNNRDYLFLLEKAMHDIGHEDNLVIELANEVRKVLGVGNVLTNVATAQLPHPPHVSIPSRQLQPLPEPIVLDG* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1096 220 Pfam ChaC-like protein 4 180 IPR006840 GO:0003839|GO:0006751
Vra5g1096 220 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 2 110 IPR036568 -
Vra5g1096 220 Gene3D - 2 180 - -
Vra5g1096 220 PANTHER GAMMA-GLUTAMYLCYCLOTRANSFERASE 2-2 1 219 - -
Vra5g1096 220 CDD GGCT_like 5 110 IPR013024 -
Vra5g1096 220 ProSitePatterns Glycosyl hydrolases family 5 signature. 170 179 IPR018087 GO:0004553|GO:0005975
Vra5g1096 220 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 1 219 IPR006840 GO:0003839|GO:0006751
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1096 Vra-Chr5 17442486 17444975 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1096 K22596 - gmx:100793027 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1096 5 17442486 17444975 Vra5g1096 5 17442486 17444975 ECH