Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1093 ATGGCTGATCATCAACCAAGAACTGCAGGTCCCTACTATGGTTCCTCCCATGGAACCTCCTATGGACCACCCTATGGAAATACCAATGAGTCCAACACCAGCAGCTACAACAACTCTGCTTCACGTCAAACGGTCAGGTTCATAACTGCTGTTACTATTGGCATCTCACTCTTGCTCTTGGCTGGGTTGATCTTCACAGGTATTGTCATAGGGTTGATAGTTGCAACTCCCCTTCTTGTGATCTTCAGCCCCATCCTTGTCCCAGCAGCATTTGTGTTGTTCCTAGTTACTTCCGGATTTATGTTCTCTGGCAGCTGTGGTGTGGCTGCCATTGCTGTTTTGTCTTGGATTTACAACTACGTGTCTGGGAACCATCCTGCAGGTTCTGATACTCTTGACTATGCAAAAGGGTACCTTGCTGATAAGGCAAGGGATGTGAAGGAGAGAGCAAAGGATTATGGAAGCTATGCTCAGGGTAAAATTCAGGAAGCTACGCAGGGAGCTTATTAA 510 0.4686 MADHQPRTAGPYYGSSHGTSYGPPYGNTNESNTSSYNNSASRQTVRFITAVTIGISLLLLAGLIFTGIVIGLIVATPLLVIFSPILVPAAFVLFLVTSGFMFSGSCGVAAIAVLSWIYNYVSGNHPAGSDTLDYAKGYLADKARDVKERAKDYGSYAQGKIQEATQGAY* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1093 169 PANTHER OLEOSIN 30 166 IPR000136 GO:0012511|GO:0016021
Vra5g1093 169 Pfam Oleosin 43 154 IPR000136 GO:0012511|GO:0016021
Vra5g1093 169 PANTHER OLEOSIN 30 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1093 Vra-Chr5 17429142 17430053 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1093 37 146 Lipid Metabolism Gene Families AT2G25890 59.091 1.94e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1093 - - vra:106761714 325.094