Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1090 ATGGAATGGAAGAAGTGTTATTTGGATGTGATATTGGTGCCCTTAGGATTTCTTATGAGCATTGCTTACCATTTCTGGCTCTGGCACACTGTTCGAACTCGGCCACACACAACTATCATTGGCATCAATGCTACTGGCAGACGCAATTGGGTTGCTACCATAATGAAGGACAACGACAAAAAAAACATCCTAGCTGTTCAATCACTGAGGAACACAATCATGGGTGCGACCCTAATGGCCACAACCTCTATTCTGCTATGCTCGGGCTTAGCAGCAATCATAAGCAGCACCTACAGTGTTAAAAAGCCACTTGAGGACACAGTTTATGGGGGTCATGGAGAGTTCATGGTATCACTCAAATATGTCACTTTGCTCTCCATTTTCCTCTTCTCATTCTTCTGCCACTCCTTGTCCATAAGGTTCATCAACCAAGTCAACATCCTTATCAACACCCCACAGGACCCCATGTCCTTGGTCAGCCCTGAATATGTTAATCAGATCTTGGAGAAAGGCTTCCTTCTTAACACTGTTGGAAACAGACTCTTCTACGCTGCACTTCCTCTTCTGCTTTGGATCTTTGGTCCTGTCTTGGTCTTCTTCTGCTCTCTCACTATGGTTCCAGTCCTTTACAATCTTGACTTTGTCGTTCCTGCCAAGGATAAGTTGCACGTAAATCAAAATACACATTTTGTATGA 696 0.4397 MEWKKCYLDVILVPLGFLMSIAYHFWLWHTVRTRPHTTIIGINATGRRNWVATIMKDNDKKNILAVQSLRNTIMGATLMATTSILLCSGLAAIISSTYSVKKPLEDTVYGGHGEFMVSLKYVTLLSIFLFSFFCHSLSIRFINQVNILINTPQDPMSLVSPEYVNQILEKGFLLNTVGNRLFYAALPLLLWIFGPVLVFFCSLTMVPVLYNLDFVVPAKDKLHVNQNTHFV* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1090 231 PANTHER - 1 230 - -
Vra5g1090 231 PANTHER PLANT/F12B17-70 PROTEIN 1 230 - -
Vra5g1090 231 Pfam Protein of unknown function, DUF599 11 215 IPR006747 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1090 Vra-Chr5 17404340 17405939 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1090 - - gmx:100780305 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1090 5 17404340 17405939 Vra5g1090 5 17404340 17405939 ECH