Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1086 ATGGCGCCTACGAAGCTATTCTTCTTTGCGTTTTCAGTAGCCCTAATTTTCTCCATCGTCGGGGCCGAGGCTGATGTTTCCGTCGAAGGAAGCGTAGCAGAGCCTGATACCTCTGCCTTCAAGATCCAATTAGATCAACTCAATTCTAAGATCCGAATTCTCGAATCTGAAATCAGAGAAAAGTCAGAAGAAGTGAAGAGGAAGGACGAAATTGTGGCCGGAAAAGAAAAAATTATTCAGGATAAATCGGTCACCATACAGTCCCTGCAGAATGATATTGCTTCTCTCCAGAAAAAAGGGTCATTGGATGCTGAAGAGCAAGTCGGAAAGGCTCATGCACGGGCTGTTGAACTACAGAAGCAGGTGGACCAGCTTAAAGGGGAACTAGAAACTCAAAACAGGGAGAAAGGGAACTGGGAAACTCGAGTGCTTGGGTTAGAGAAAAAAGTTAATGACTTGAACTCAAAATTAGAAGATCTTCAAAAGATAAACCAGGAGCAGAGGACACAGATTCAGAAAACGGAACGTGCTCTTAAAGTTACTGAGGAAGAGATGGTGAAGGCTAAGTTTGAGGCAGCTGTCACAGAAGCAGAGTTGAGTGCGACACGTGGTGCTTGGCTTCCACCTTGGCTTGCTGTACACTATCTTCATAGTAAGTCTTGTGTTGAGACTCAATGGAACAAACATGGGAAACCTGTTTGGGAAAAGGTTGCTCAAAAGGCCCTAGATAAGAAGGCACAAGCTGGAAAGTGGGCTGAACCTCATGTGGAAACCATTAAAACTAAATGGGTCCCTGCTGTAAAAGAACAGTGGTCTGTGGTGAAAACAAGTGCTGAACCGCATTTGCAATTATTGACCACAAAAACTGTTGAAGGTTATGAGGCTACCAGGAAGACAATTTCTCCCCATTTAAGCAAGGCAAAAGAATTTGTTCATCCTTATTATCAGGAAGCTAGAAAGTTCAGCAAGCCATACATTGATCAGATTGCTGTTGCAGCTAAACCTCACGTTGATAAAGTACAAGTGGTTTTGAAGCCCTACACAAATAAAGTTGTTCATAGTTATGGGAAATTTTTGGAATCAGCTACTACATATCATCGCCAGGTCCAAGCCACTGTCCAAGAGACACTGAAAAAGCATGAGCTCACCAGACCTCTTGCTACTAAAGAGTTAGAATGGTTTGCGGCCTCTGCTCTTTTGGCTCTACCCATTATTTTTGTGGCTAGAGTGTTTTCAGCTGTGTTCTGCAATAAGAAAGTGAATAAACCTTATCGAAGTGGAAATAACCATGCGCGACGCAAAGCTAAACGAAGCCATCCAGACAAGCACACATCATAA 1338 0.432 MAPTKLFFFAFSVALIFSIVGAEADVSVEGSVAEPDTSAFKIQLDQLNSKIRILESEIREKSEEVKRKDEIVAGKEKIIQDKSVTIQSLQNDIASLQKKGSLDAEEQVGKAHARAVELQKQVDQLKGELETQNREKGNWETRVLGLEKKVNDLNSKLEDLQKINQEQRTQIQKTERALKVTEEEMVKAKFEAAVTEAELSATRGAWLPPWLAVHYLHSKSCVETQWNKHGKPVWEKVAQKALDKKAQAGKWAEPHVETIKTKWVPAVKEQWSVVKTSAEPHLQLLTTKTVEGYEATRKTISPHLSKAKEFVHPYYQEARKFSKPYIDQIAVAAKPHVDKVQVVLKPYTNKVVHSYGKFLESATTYHRQVQATVQETLKKHELTRPLATKELEWFAASALLALPIIFVARVFSAVFCNKKVNKPYRSGNNHARRKAKRSHPDKHTS* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1086 445 SUPERFAMILY Tropomyosin 33 200 - -
Vra5g1086 445 Coils Coil 79 99 - -
Vra5g1086 445 Coils Coil 108 191 - -
Vra5g1086 445 MobiDBLite consensus disorder prediction 425 445 - -
Vra5g1086 445 Coils Coil 44 71 - -
Vra5g1086 445 PANTHER OS08G0519400 PROTEIN 1 442 - -
Vra5g1086 445 PANTHER OS08G0519400 PROTEIN 1 442 - -
Vra5g1086 445 SUPERFAMILY Apolipoprotein A-I 207 377 - -
Vra5g1086 445 Gene3D Apolipoprotein 217 368 - -
Vra5g1086 445 MobiDBLite consensus disorder prediction 423 445 - -
Vra5g1086 445 Gene3D - 39 214 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1086 - - var:108321842 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1086 5 17369549 17378976 Vra5g1086 5 17369549 17378976 ECH