Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1078 ATGCAGAGTCTTCAGCAGAAGGCCTCTGAATGGAGTGGTGTTTCCCCAGATGATGCTTTTGCTATCGACGACGGCGATTTGTTTCACACTCTCGGCCTCCAAACCTTCATTACACTCTCTACCAATTTCTACAACAGGGTATATGATGATGATGAAGAGTGGTTTCGTTCAATATTTGGGAATTCAGACAAGGAAACGGCAATTCAGAACCAGTACGAATTCCTCGTCCAGAGGATGGGAGGTCCTCCTCTCTATTCTCAAAGAAGAGGGCACCCTGCTCTGATTACTCGACATCGACCATTTCCTGTGACACATGAAGCTGCTGATAGGTGGCTAAATCATATGGGACAAGCATTGGACAGTACCTCAGCTATAGATGATGATTCAAAGATCAAACTCATGAACTTTTTCAGGCACACTGCATATTTCCTTGTGGCTGGAGTTGAGCGAAAGGATCAACACCATCACACACCATGTAAGGATGCTGCCCTGAAGCAACACCCATGTAAAAACTTCTAG 519 0.4528 MQSLQQKASEWSGVSPDDAFAIDDGDLFHTLGLQTFITLSTNFYNRVYDDDEEWFRSIFGNSDKETAIQNQYEFLVQRMGGPPLYSQRRGHPALITRHRPFPVTHEAADRWLNHMGQALDSTSAIDDDSKIKLMNFFRHTAYFLVAGVERKDQHHHTPCKDAALKQHPCKNF* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1078 172 CDD TrHb2_AtGlb3-like_O 31 146 - -
Vra5g1078 172 PANTHER TWO-ON-TWO HEMOGLOBIN-3 1 158 IPR044203 GO:0005344|GO:0015671
Vra5g1078 172 SUPERFAMILY Globin-like 27 145 IPR009050 -
Vra5g1078 172 Gene3D Globins 1 151 IPR012292 GO:0019825|GO:0020037
Vra5g1078 172 Pfam Bacterial-like globin 27 142 IPR001486 GO:0019825
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1078 Vra-Chr5 17324988 17326503 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1078 - - gmx:547753 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1078 5 17324988 17326503 Vra5g1078 5 17324988 17326503 ECH