Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1076 ATGGGTTGCGCACAGTCCCGAATAGACAACGAGGAATCCGTGTCACGCTGTAAGGACCGCAAGAACTTGATGAAGGACGCCGTCGTGGCTCGCAACGCCTTCGCCGCCGGCCATTCTGGTTACGCCGTCGCACTCAAGAACACCGGCGCCGCCCTCAGCGACTACGCCCTCGGCGAGACACACGACCCCCACCCTCCACCGCCCCTCGACCCTCCCACCGTCACCGCTGGCCCTCCACCGCCACCCCCGCCGCCCATCGAGGACTCCCTTCCTCCCCCGCCCCCGCCGCTCCCCGAGTTCTCCCCTGTACCGCTCACGCGCGCCGCCACCATGCCCGCTGGCGCCATGCACCACAGCAGCCCCGTTCCGCTCACCATCGCCGAGGAGGAGGAAGAAGAAACCCCCAAGCTGGTGAAGAAAACCGCCGGATCCTTGTCGCCGGAGATGAAGACACCTCCGCCGCCGATGCCGGAGTCTAAGGGCATGGCTTGGGATTATTTCTTCATGGTGGACAACATGCCTGGAGCTTCTCTCAATGCTGAAGATGATGATGATGATGATAATAACGATAATGATGATAATGGTGATATTGAGGGTAAAATGGCGAATGTGGTTGAAGACGAGGTTGAGCCTAAAACTCCAGAGAAAGTGCAGGAACATGTAAATGAAAACATTCATGAAGAGCATGATGAGATAAGTGAGGCAAAGATGCACATTGAGCATTCTAAAACTGCTCCAGCTGAGTTTAGGAGAGCAATAAAGGTGGTTCCTTCCGTTACTCTGATGCAGATTCTCAGTGTCCTTGATGATCACTTTCTGAAGGCTTCCGAGAGTGCTCAAGAAGTTACCAAGATGCTTGAGGCTACTAGGTTGCATTATCATTCCAATTTTGCTGATAATCGCGGGCACATTGATCATTCTGCTAGGGTTATGCGCGTCATAACTTGGAACAGGTCGTTCAAAGGTGTGTCCAATGGGGATGCTGGGAAAGATGATATTGATTCCGAAGAGTATGAAACTCATGCCACTGTTTTGGACAAGTTGCTGGCCTGGGAAAAGAAACTTTATGAAGAGGTCAAGCAAGGTGAGCTAATGAAGTTCGAGTATCAGAGAAAAGTTGCAATTCTAAACAAGCAGAAGAAGCGTGGTGCCAGCGCTGAATCCTTGGAAAAAACTAAAGCAGCCGTTAGTCATTTGCACACAAGATATATTGTTGACATGCAATCCATGGACTCAACAGTTTCAGAAGTGAACCAGATTCGAGATGCTCAGCTGTATCCAAAACTTGTGGCTCTTGTTATTGAGATGGCAAATATGTGGGAACATATGTGCACATATCATGACAGCCAGCTGAAAATAGTTACGGACCTCAAATCTCTTGATATTTCTCAAGCTCCCAAGGAAACAACAAAGCATCATTACGAACGCACTTTGCAACTTTGGAATGTCGTCCAAGAATGGCATTTACAATTTGAGAAGCTTGTGACTCAACAAAAGCATTACATAAAAGCTCTTAACAGTTGGCTAAAATTAAATCTCATCCCTATTGAAAGCAACCTTAAAGAGAAAATATCATCGCCCCCTAAAGCGCAGAATCCGCCAATCCAATACCTTCTCCACGCGTGGCATGATTATGTTGACAAGCTTCCTGATGAGCTTGCCAAATCTGCTATTTCCTCCTTTGCTGCTGTGATAAAGACCATCATACTTCAGCAGGAAGAAGAGATGAAGTTGAAGGAGAGGTGTGAGGAAACCAGAAAGGAATACTTAAAGAAAAAACAAGCCTTTGAGGAATGGTACCAGAAGCATTTACTGCGGAAGGGGCCTGAAGAAGCAGAACATGAAAGGGGAGAGGAAGTGAACACCAACAACCCTGTCTCGGATAGACAATTTGTCGTTGAGAGCTTGCAGAAGAAATTAGAAGAAGAAATTGAATCTCACCAAAAACATTGTGTTCAGGTGCGAGAGAAATCACTACAGTGTTTCAAAACTCGCTTGCCTGAACTCTTCCGTGCTTTATCAGACTATTCTCATGCCTGTTTTGATGCTTATGAGAAACTGAAGTCAATAACACAGTCACGGGGTGGTGGGGCATGA 2097 0.4788 MGCAQSRIDNEESVSRCKDRKNLMKDAVVARNAFAAGHSGYAVALKNTGAALSDYALGETHDPHPPPPLDPPTVTAGPPPPPPPPIEDSLPPPPPPLPEFSPVPLTRAATMPAGAMHHSSPVPLTIAEEEEEETPKLVKKTAGSLSPEMKTPPPPMPESKGMAWDYFFMVDNMPGASLNAEDDDDDDNNDNDDNGDIEGKMANVVEDEVEPKTPEKVQEHVNENIHEEHDEISEAKMHIEHSKTAPAEFRRAIKVVPSVTLMQILSVLDDHFLKASESAQEVTKMLEATRLHYHSNFADNRGHIDHSARVMRVITWNRSFKGVSNGDAGKDDIDSEEYETHATVLDKLLAWEKKLYEEVKQGELMKFEYQRKVAILNKQKKRGASAESLEKTKAAVSHLHTRYIVDMQSMDSTVSEVNQIRDAQLYPKLVALVIEMANMWEHMCTYHDSQLKIVTDLKSLDISQAPKETTKHHYERTLQLWNVVQEWHLQFEKLVTQQKHYIKALNSWLKLNLIPIESNLKEKISSPPKAQNPPIQYLLHAWHDYVDKLPDELAKSAISSFAAVIKTIILQQEEEMKLKERCEETRKEYLKKKQAFEEWYQKHLLRKGPEEAEHERGEEVNTNNPVSDRQFVVESLQKKLEEEIESHQKHCVQVREKSLQCFKTRLPELFRALSDYSHACFDAYEKLKSITQSRGGGA* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1076 698 MobiDBLite consensus disorder prediction 56 104 - -
Vra5g1076 698 Coils Coil 568 588 - -
Vra5g1076 698 MobiDBLite consensus disorder prediction 128 156 - -
Vra5g1076 698 PANTHER UNCHARACTERIZED 1 695 - -
Vra5g1076 698 MobiDBLite consensus disorder prediction 61 102 - -
Vra5g1076 698 MobiDBLite consensus disorder prediction 175 198 - -
Vra5g1076 698 MobiDBLite consensus disorder prediction 178 193 - -
Vra5g1076 698 SUPERFAMILY Formin homology 2 domain (FH2 domain) 80 314 - -
Vra5g1076 698 Coils Coil 637 657 - -
Vra5g1076 698 Pfam Protein of unknown function (DUF632) 261 566 IPR006867 -
Vra5g1076 698 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Vra5g1076 698 PANTHER DNA LIGASE (DUF630 AND DUF632) 1 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1076 Vra-Chr5 17313955 17317649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1076 1 588 Acyl Lipid Metabolism Gene Families AT2G27090 24.058 2.28e-42 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1076 - - gmx:100807597 1118.61