Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1074 ATGGTAGAAGCAGGGGAAGAAGTTATCGAGTTCAAGTGGGGTAATATGAGATCGGTTGGCGGGAGGAAGAAGGATGTGCGCTTTTACGATTCTTTTTTCTACGATGGTGTAGAATACTCGCTCTTCGACTCGGTGTTTCTATACAAGGAAGGCGAACCCGAACATTACATTGGCAAAATCGTTAAAATATGGGAGACCTCTGATAAGAACAAGAGAGTCAAGGTTCTATGGTATTTTCGTCCTTCTGAGATTGGAAACTTTTTGGAAGGAAATGACGCACTCGAGAACGAGTTGTTTCTGGCATCTGGTGAAGGTGAAGGACTTGCAAACGTCAATCCTCTGGAAGCTATTGCCGGCAAATGCAATATTGTTTGCATTTCTAAGGACAGCCGGAATCCATATCCATCAGATGCAGAAGTTAAAATGGCTGAATTTGTATTCTATCGTTTCTTTGATGTTGGAAAGTGCAAGATATTGGATAAGATAGATGACAAGATTGCTGGAATTGAAGTTAAAAATATTTTTAACCATTTAGATAGTCGAAAGCATGTTGGTATTGGGAAACCCGGTTTAGAAAAGAAAGAGGTTAGTGGGAACTTCATGGCATGTAATGAAGCTGTGGCTCCTTTGAGTCAAAATAACAATCAGCCATTGATTGAAAAACCAGATGGCAAGTGTTTTGACGCATTAGCTAGAGAAAATGCTGTTTCTAAATCATTGTTGGGAAAAAAACCTACTTTGAGAACTGGTGTAAAGGAAGCAAGTGAACTTAATGATTCTTACTTGGTTTCCAACAACAAGAATGCACCTCAAGATAAAGTTGAAGAAAATGGAGGTCACAAGGCCTCCTTGGTTAAACAAAAATCATTTTCTAAACTATCACACGCTTCTAGAACTGATTTGAAAATGAGGGAAATGGCTAAAATGGACTATGGGCGTGGAAATGACTCTATTGAGAAGAACATTTCCACGTCAAGAGTTAATTTAGGAAAGGACGATCACGAGGATGAAGGTGTTTCAGTTGGACAATTTAATAAGGGAGTAGTGGAGGAAATGACTTCCAAGAAGGAAAATCGGGGCGGATTTGGTAAGGTTTCTAGTGCAAAGATGAACAATAATGGGAAAAGTCGAAAGCTTATTACTTATGACGATGATGACGATAATGACGATAATGTGAAGACTGTAGCTCCATCTTCATCTAAGGATAAATATAAGCTTCAACGTGAAGCAAATTCTTTTGATGTGGAGGAGCTTCCTTCCAAGAGGTTAAAGATCGACAAGGCAACGAAACTCGCTAGTGACAAGTTGTGCAAAGACTCTTCAGTGATTTCGTCGAATGTGGAACACGAGAGAGATTTTCGTCTGATGGAAGTTACTCGAAGACCCGATGATGATAGAAGCAAATGGTTTAAGGAAATTCCTTGGGAAGAAAAACTGAAAACTGCTTTTGAGCAACGAAAACTTGTGCTACTTCAAAACTTGGATCCATCTTTATCTTCATCAGAGGTACAGAATATTATTTGGACTGGCTTTAAAGAACGTTGCACTGCAAAGGTGATCCAGAAAACTGATTACACTAGCCCTCATTCTGGTCAAGCTTTTGCTATATTTAAGAAAATGGAAGCAGCAGCAAAGGTTGTTAAAGAACTAGATGAGGGCTGCTTCATATTGTCAAACGGACTACCCCTTGTTGGAAGCTTTGGAATTCCTTGCTTTCCAGAAAAGAAGCCAGTATTCTATGGGCATCATGTTGTTGATCAACTTAGAATGATGCAGATGCATCGAGAAATGAAAGATGCTGTATCTACTTCACATTGTTCTCAGCCCAACAATATTGAATATGACATGGCCATAGAGTGGTGCTTATTGCAAGAAAGAGCAAACAAATCATGGAGAATATTATATAAGCAACAAGGCGAGCAGTTGAGAAAACTCAAAGCTAAGCTGAAGTCTAAAACTTAA 1962 0.3919 MVEAGEEVIEFKWGNMRSVGGRKKDVRFYDSFFYDGVEYSLFDSVFLYKEGEPEHYIGKIVKIWETSDKNKRVKVLWYFRPSEIGNFLEGNDALENELFLASGEGEGLANVNPLEAIAGKCNIVCISKDSRNPYPSDAEVKMAEFVFYRFFDVGKCKILDKIDDKIAGIEVKNIFNHLDSRKHVGIGKPGLEKKEVSGNFMACNEAVAPLSQNNNQPLIEKPDGKCFDALARENAVSKSLLGKKPTLRTGVKEASELNDSYLVSNNKNAPQDKVEENGGHKASLVKQKSFSKLSHASRTDLKMREMAKMDYGRGNDSIEKNISTSRVNLGKDDHEDEGVSVGQFNKGVVEEMTSKKENRGGFGKVSSAKMNNNGKSRKLITYDDDDDNDDNVKTVAPSSSKDKYKLQREANSFDVEELPSKRLKIDKATKLASDKLCKDSSVISSNVEHERDFRLMEVTRRPDDDRSKWFKEIPWEEKLKTAFEQRKLVLLQNLDPSLSSSEVQNIIWTGFKERCTAKVIQKTDYTSPHSGQAFAIFKKMEAAAKVVKELDEGCFILSNGLPLVGSFGIPCFPEKKPVFYGHHVVDQLRMMQMHREMKDAVSTSHCSQPNNIEYDMAIEWCLLQERANKSWRILYKQQGEQLRKLKAKLKSKT* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1074 653 MobiDBLite consensus disorder prediction 353 402 - -
Vra5g1074 653 SMART BAH_4 37 163 IPR001025 GO:0003682
Vra5g1074 653 Pfam BAH domain 43 126 IPR001025 GO:0003682
Vra5g1074 653 PANTHER PROTEIN ANTI-SILENCING 1 4 651 - -
Vra5g1074 653 PANTHER PROTEIN ANTI-SILENCING 1 4 651 - -
Vra5g1074 653 ProSiteProfiles BAH domain profile. 37 162 IPR001025 GO:0003682
Vra5g1074 653 CDD RRM_SF 489 551 - -
Vra5g1074 653 Gene3D - 7 161 IPR043151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1074 Vra-Chr5 17249033 17274113 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1074 - - aprc:113865076 853.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1074 5 17249033 17274113 Vra5g1074 5 17249033 17274113 ECH