Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1071 ATGGAAAATCTTCTCCTTCCCATTTTTGCTTTACTCACTTTTGCAGTGGTGGTAACCCACGGTGGTTTGCCTCCTGAACTTTACTGGAAGTCGGTGCTTCCTAATACACGAATTCCAAAAGCTGTCACTGATAGTCTTGATCATGATTGGGTGAACTATGGAAGTGGAGGAGTGAACTATGGAAAGGGTGGAGAGAACTATAGAAAGGAAGGGGAGTACTATGGAAAGGGGGAGGAGGACTATGGAAAGGGAGGAGAGGACTATGGAAAGGGTGGGGAGGACTATGGAAAGGAAGGGGATGACTATGGAAAGGGTGGGGAGGACTATGGAAAGGGAGGAGATGACTATGGAAAGGAAGGGGATGACTATGGAAAGGGCGGGGAAGACTATGGAAAGGGTGGGGAAGACTATGGAAAGGGAGGAGAGGACTATGGAAAGGGGGAGGACTATGGAAAAGGAGGGGAGTACTATGGAAAGGGTGGAGAGGATTATGGAAAGGGAGGGGATGACTATGGAAAGGGAGAGGAGAACTATGGAAAGGGTGGAGAGGACTATGGAAAGGGAGGGGATGACTATGGAAAGGGTGGCAACAATGCCATCCTTGGTGAAGGAGTTTCATTTATATACAATGCCACAGCGACCAAATTACACGGTGACACCACAATGGCACGCTTCTTCAAGGAAAATGACTTGCATTATGGAACAAAAATGGACCTGCACTTCACTCCAAGTTCCAACCAAGCCACCTTCTTGCCACGCCAAGTTGCAGATTCAATACCCTTTTCATCCAGCAAGGTGAACGATGTCTTCACCAAGTTTTCCATCAAACCCGAGTCAGAGGAGGCTAATGCAGTGAAGAACACTCTTAGNGAATGTGAAGAAACCAGTATCAAGGGTGAGGAAAAGTACTGTGCCACTTCACTTGAGTCCATGGTTGATTTCAGCACTTCCAAGCTTGGAAAAAACCTTGTGGTTTTGTCCACAGAAGTTGAGAAAGAAACGGGGTTGCAGCAATACACCATTGCACCGGGAGTGAAGAAGATTTCAGGAGATAAAGTTGTTGTGTGTCATAAGCAGAATTACCCTTATGCTGTTTTTTACTGCCACAAAACGGAGACCACCAGAACTTACTTTGTACCTTTGAAGGGTGCTAACGGGATCAAAGTTAAAGCTGTGGCAGTGTGCGACATTGACACATCGCAATGGAACCCCAAACATCTGGCCTTTCAAGTGCTCAAGGTTAAACCAGGAACTGCTCCTGTCTGCCAGTTTCTTCCTGAGGATCATGTTGTTTGGGTTCAAAAGTAG 1308 0.4656 MENLLLPIFALLTFAVVVTHGGLPPELYWKSVLPNTRIPKAVTDSLDHDWVNYGSGGVNYGKGGENYRKEGEYYGKGEEDYGKGGEDYGKGGEDYGKEGDDYGKGGEDYGKGGDDYGKEGDDYGKGGEDYGKGGEDYGKGGEDYGKGEDYGKGGEYYGKGGEDYGKGGDDYGKGEENYGKGGEDYGKGGDDYGKGGNNAILGEGVSFIYNATATKLHGDTTMARFFKENDLHYGTKMDLHFTPSSNQATFLPRQVADSIPFSSSKVNDVFTKFSIKPESEEANAVKNTLXECEETSIKGEEKYCATSLESMVDFSTSKLGKNLVVLSTEVEKETGLQQYTIAPGVKKISGDKVVVCHKQNYPYAVFYCHKTETTRTYFVPLKGANGIKVKAVAVCDIDTSQWNPKHLAFQVLKVKPGTAPVCQFLPEDHVVWVQK* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1071 435 SMART BURP_2 223 435 IPR004873 -
Vra5g1071 435 ProSiteProfiles BURP domain profile. 225 435 IPR004873 -
Vra5g1071 435 MobiDBLite consensus disorder prediction 162 182 - -
Vra5g1071 435 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 13 433 IPR044816 -
Vra5g1071 435 Pfam BURP domain 225 433 IPR004873 -
Vra5g1071 435 MobiDBLite consensus disorder prediction 74 145 - -
Vra5g1071 435 MobiDBLite consensus disorder prediction 161 182 - -
Vra5g1071 435 PANTHER BURP DOMAIN PROTEIN RD22 13 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1071 Vra-Chr5 17169920 17172582 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1071 - - vra:106760384 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1071 5 17169920 17172582 Vra5g1071 5 17169920 17172582 ECH