Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1069 ATGGACTATTGCATAAGAGAAATAGAGGGAAAGCAAGCGCATGACCCTTTGTTCAACAAGGCATCGTCTTCTTCAACGGTGTGGGTTGAAGGGCCTGTGATAGTAGGAGCTGGGCCATCGGGGCTTGCAGCAGCAGCGTGTCTGAGAGAGAAAAACATCGAAAGCGTGATTCTAGAAAGATCCAATTGCATAGCTTCTCTGTGGCAGCTCAAGACTTATGATCGCCTGCGCCTTCACCTACCAAAGCAATTCTGCGAGCTTCCCTTCATGCCCTTCCCTTCTCACTTCCCCACATACCCTTCCAAGCAGCAGTTCGTCGAGTACTTGGAAACTTACGCGCAAACCTTCAAGATTAAGCCAACCTTCAATGAGACGGTGAAGCATGCAGAGTTTGACGCCAAACTCGCGCTGTGGCGGGTGAAGACCGTCGACAAGTCGGAGAACACCACGGAGTACTTGTGCCGGTGGCTGATCGTGGCAACCGGCGAGAATGCCGAGGCGGTGGTGCCGGATATCGAAGGGGTAGAAGAGTTTGGTGCGCCCATAAGACACACGAGTTTGTATAAGAGTGGAGAAGAGTTCAGAGAGAAAAGGGTTTTGGTGGTTGGGTGTGGAAATTCTGGCATGGAGGTTTGCTTGGATCTTTGCAACCATAATGCTACTCCTTCACTTGTCGTCAGAGACACAGTACACGTCCTACCACGAGAGATGCTGGGAAAATCAACTTTCGGGTTGTCCATGTGGTTGCTGAAATGGTTACCCATGCGACTTGTCGATCGATTCTTGCTAATGGTGTCATGGCTTATGCTGGGTGACACTTCTGAATTGGGATTGGATCGACCGTGTTTGGGTCCCCTCGAACTCAAAAACATGTCAGGAAAGACCCCTGTGCTAGATGTGGGTACCCTTGCCAAGATTAAAGGTGGAGACATTAAGGTGCGTCCAGGGATTAAGCGACTTAAACGTCACACAGTGGAATTTGTGGATGGAAGGACAGAGAATTATGATGCAATCATATTGGCGACTGGTTACAAAAGCAATGTGCCCTATTGGCTTAAGGAAGAAGATATGTTCTCCAAGGAAGATGGGTACCCTGTGACGCCATTTCCGAATGGGTGGAAAGGTAAAAATGGTCTGTATGCTGTGGGTTTTACCAAAAAGGGACTACTGGGTGCATCCATGGATGCAAAGAGAATAGCTCAAGACATTGAACGGTGTTTTGAAGCTGAGGCAAATCATCGAACAGCTTTTGCGCGCTCACACTTGCCGCAACCAAATTCATAG 1284 0.4883 MDYCIREIEGKQAHDPLFNKASSSSTVWVEGPVIVGAGPSGLAAAACLREKNIESVILERSNCIASLWQLKTYDRLRLHLPKQFCELPFMPFPSHFPTYPSKQQFVEYLETYAQTFKIKPTFNETVKHAEFDAKLALWRVKTVDKSENTTEYLCRWLIVATGENAEAVVPDIEGVEEFGAPIRHTSLYKSGEEFREKRVLVVGCGNSGMEVCLDLCNHNATPSLVVRDTVHVLPREMLGKSTFGLSMWLLKWLPMRLVDRFLLMVSWLMLGDTSELGLDRPCLGPLELKNMSGKTPVLDVGTLAKIKGGDIKVRPGIKRLKRHTVEFVDGRTENYDAIILATGYKSNVPYWLKEEDMFSKEDGYPVTPFPNGWKGKNGLYAVGFTKKGLLGASMDAKRIAQDIERCFEAEANHRTAFARSHLPQPNS* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1069 427 PRINTS FAD-dependent pyridine nucleotide reductase signature 32 51 - -
Vra5g1069 427 PRINTS FAD-dependent pyridine nucleotide reductase signature 198 216 - -
Vra5g1069 427 SUPERFAMILY FAD/NAD(P)-binding domain 33 231 IPR036188 -
Vra5g1069 427 PRINTS Pyridine nucleotide disulphide reductase class-II signature 31 53 - -
Vra5g1069 427 PRINTS Pyridine nucleotide disulphide reductase class-II signature 194 218 - -
Vra5g1069 427 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA6 21 416 - -
Vra5g1069 427 Gene3D - 32 413 IPR036188 -
Vra5g1069 427 Pfam Flavin-binding monooxygenase-like 34 351 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vra5g1069 427 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 21 416 - -
Vra5g1069 427 SUPERFAMILY FAD/NAD(P)-binding domain 195 405 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1069 Vra-Chr5 17097676 17101207 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1069 K11816 - gmx:100799546 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1069 5 17097676 17101207 Vra5g1069 5 17097676 17101207 ECH