Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1062 ATGGTGTTCTACTTCAAGGCGCGTCCTGAAGCCGGCGACTACACCATCTTCATGGGTCTCGACAAGTTCGAAAACGAGGAGCTCATCAAATACGGTTTTCCCGAAGATATTTGGTTTCATGTTGATAAAATGTCTTCAGCCCATGTCTATGTCAGGCTGCACAAAGGCCAGACTATTGATGGCATGAGTGAAGGTTTACTGGAAGACTGTGCTCAGCTTGTCAAAGCAAATTCAATTCAAGGGAATAAAGTGAACAATGTTGATGTTGTTTACACTCCATGGTCTAATTTAAAGAAAACTGCTTCAATGGATGTTGGTCAAGTTGGTTTTCACAATTCAAAAATGGTTCGAACAGTGAGAGTTGAGAAGAGGATAAATGAGATTGTTAACAGGCTAAACAAGACAAAAGTGGAAAGGAAACCTGATTTGAAAGCTGAGAGAGAAGCGGTTAATGCAGCTGAACGAGCTGAGAGAAAACAACAATTAAGAGAAAAGAAACGCCGTGAGGAATTGGAAAGACTCGACAAGGAGAGACAAGCAGAGCTTCGGAGCTACAAGGGTTTGATGGTTGCTGAAAATATGACATCAAACAAACAAATTGCATCTGGAAGCAAATCATTGCAGGAACTGGAGGAGGATTTCATGTAA 648 0.4136 MVFYFKARPEAGDYTIFMGLDKFENEELIKYGFPEDIWFHVDKMSSAHVYVRLHKGQTIDGMSEGLLEDCAQLVKANSIQGNKVNNVDVVYTPWSNLKKTASMDVGQVGFHNSKMVRTVRVEKRINEIVNRLNKTKVERKPDLKAEREAVNAAERAERKQQLREKKRREELERLDKERQAELRSYKGLMVAENMTSNKQIASGSKSLQELEEDFM* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1062 215 MobiDBLite consensus disorder prediction 152 171 - -
Vra5g1062 215 Pfam NFACT protein RNA binding domain 1 112 IPR008532 -
Vra5g1062 215 PANTHER DUF814-RELATED 1 215 IPR039730 -
Vra5g1062 215 MobiDBLite consensus disorder prediction 196 215 - -
Vra5g1062 215 Coils Coil 149 179 - -
Vra5g1062 215 PANTHER OS01G0750500 PROTEIN 1 215 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1062 - - gmx:100802228 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1062 5 17004106 17007388 Vra5g1062 5 17004106 17007388 ECH