Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1058 ATGGCGAACCAGGACTACGAAGAGCGCCCACAAACGCAGGAGCTCGGGTACGACCCGAACTTCGTCCCGGACTCTGTGAAATCGTTCGTCGTTCACCTGTACCGTCACATCCGCGAGAAGAACGTGTACGAGATCCACCAGATGTACGAGAGTTCGTTCCAGACCCTGTCGGAGCGGCTCTTCAAGGACACGCCGTGGCCCTCCGTGGACGCCGTGGCGCATTACGTGGATAACGACCACGTTTTTTGCCTCCTCTACCGCGAGATGTGGTTCCGCCACCTCTACGCGCGCCTCACGCCCACGCTCCGCCAGCGCATCGACTCCTGGGACAACTACTGCAGCCTTTTCCAGGTGGTCCTCCACGGTGTTGTAAACATGCAGCTCCCCAACCAGTGGCTGTGGGACATGGTCGACGAGTTCGTCTACCAGTTCCAGAGCTTCTGCCAATATCGTGCCAAGATGAAGAACAAGACCGAACAGGAGATCACGCTCTTGCGCCAGTTCGACCAGGCCTGGAATGTGTATGGGGTTTTGAACTTCCTTCAGGCGCTGGTGGAGAAGAGTACCATTATTCAGATTCTGGAGCAGGAGAAGGAGGGGCTCGAACAGTTTACTGCCACGGATGGATATGATTACAATGGGGGGAGTAATGTGTTGAAGGTGCTGGGGTATTTTAGTATGGTGGGGTTGCTTAGGGTTCATTGCTTGCTGGGGGATTATCATACTGGGATCAAGTGTTTGCTTCCTATTGATATTAGTCAGCAAGGGGTTTATACCAGTGTTATTGGGAGTCACATCACCACCATTTATCACTATGGTTTTGCCAATCTCATGCTCCGCAGATATGTGGAAGCAATTCGAGAATTTAACAAAATTCTCTTGTACATCTTCAAGACAAAACAGTATCACCAGAAATCGCCCCAGTATGAGCAGATACTGAAGAAAAATGAACAAATGTATGCCTTGCTGGCAATTTGTCTTTCACTCTGTCCCCAAACCAGGCTTGTTGATGAAACTGTGAACTCTCAGTTACGGGAGAAGTATGGTGAAAAGATGGCTAGAATGCAGCGATATGACGATGAGGCATTTGCTATCTATGATGAGCTCTTCTCCTATGCATGCCCTAAGTTCATTACCCCTTCAGCTCCTAGTTTTGAGGAGCCTCTTGTAAATTATAATCAGGATGCCTATAGACTTCAATTAAAACTGTTCCTTTATGAAGCAAAGCAGCAACAGTTGTTATCAGGTGTCCGGACCTTCTTGAAAGTGTATTCAACAATCTCCTTTGCAAAACTTGCGAGTTACATGGAAGTGGATGAATCCACCTTAAGGACTATCTTGATCACATACAAGCACAAGACACATGCTGTTGATAGTGATGGGAAAATTACATCCAATGCAGATGTAGATTTCTATATCGATGAGGACACAATTCATGTTGTGGAGTCCAAGCCTGCGAAACGTTATGGTGATTACTTTTTGCGTCAGATTGTCAAGCTTGAAGGGGTGATCAATGAGATGGACGGTATAAAGCTGGATTGA 1542 0.4767 MANQDYEERPQTQELGYDPNFVPDSVKSFVVHLYRHIREKNVYEIHQMYESSFQTLSERLFKDTPWPSVDAVAHYVDNDHVFCLLYREMWFRHLYARLTPTLRQRIDSWDNYCSLFQVVLHGVVNMQLPNQWLWDMVDEFVYQFQSFCQYRAKMKNKTEQEITLLRQFDQAWNVYGVLNFLQALVEKSTIIQILEQEKEGLEQFTATDGYDYNGGSNVLKVLGYFSMVGLLRVHCLLGDYHTGIKCLLPIDISQQGVYTSVIGSHITTIYHYGFANLMLRRYVEAIREFNKILLYIFKTKQYHQKSPQYEQILKKNEQMYALLAICLSLCPQTRLVDETVNSQLREKYGEKMARMQRYDDEAFAIYDELFSYACPKFITPSAPSFEEPLVNYNQDAYRLQLKLFLYEAKQQQLLSGVRTFLKVYSTISFAKLASYMEVDESTLRTILITYKHKTHAVDSDGKITSNADVDFYIDEDTIHVVESKPAKRYGDYFLRQIVKLEGVINEMDGIKLD* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1058 513 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 17 512 IPR019382 GO:0003743|GO:0005737|GO:0005852
Vra5g1058 513 Coils Coil 341 361 - -
Vra5g1058 513 Pfam RNA polymerase I-associated factor PAF67 104 499 IPR019382 GO:0003743|GO:0005737|GO:0005852
Vra5g1058 513 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT L 17 512 - -
Vra5g1058 513 Hamap Eukaryotic translation initiation factor 3 subunit L [EIF3L]. 6 502 IPR019382 GO:0003743|GO:0005737|GO:0005852
Vra5g1058 513 ProSiteProfiles PCI domain profile. 288 487 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1058 Vra-Chr5 16964469 16968051 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1058 K15029 - gmx:100804691 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1058 5 16964469 16968051 Vra5g1058 5 16964469 16968051 ECH