Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1048 ATGGCCATGGCGATTAGGGTTTTTCTCCTCCTTCTCTTCTTTCTCTCATCAACCAATATCGGTTATTCTCTTTTCGAAGATCAAGTTGGTCTCATGGATTGGCACCAACAGTACATCGGGAAAGTAAAGCACGCTTTGTTCCACACTCAAAAGACTGGCCGGAAGCGTGTTTTGGTGTCCACTGAAGAGAACGTTGTAGCTTCACTCGACCTTCGTCATGGAGAAATTTTTTGGAGGCATGTTCTTGGGACCAACGATGTTGTTGATGGACTTGACATTGCCCTGGGAAAATATGTCATAACTCTTTCGTCGGATGGAAGTATATTGAGAGCATGGAACCTTCCTGATGGACAGATGGTTTGGGAGACTTCCCTTCAAGGCTCAAAGACATCAAAGTCAATATTATACATTTCAAAAAACCTGAAAGCTGACAAGGATGATTTGATCCTTGTTTTTGGTAAAGGCAGTCTCCATGCTGTTTCCGGCATAGATGGTGAAGTTCTCTGGAGGAAAGATTTTGCAGGTGAAAGCAGCATTGAGGTTAGCCATATTATTCAGTCCACTGACAAGATCTATGCTGCTGGTTTTGTTGGATCTTCAAAGTTTTATGTTTATGGATTGAATGCTGATACTGGAAAATTGCTCAAGGATGATCATACAATACTTCCCTGTGATACTTTTGGGGAATTATTATCTGTCTCAGGTGATAAGTTTGTGGTACTGGATAAGATGAGGTCTAAGATATTGACGATAAACATTAAGAATGGAGAGATTAGTTACAAACAGAAGCTCATTTCAGACCTCATCAAGGATTCATCTGGACAGGCAGTAATATTACCATCAAGGCTCCCTGAATTGTTTGCATTGCGTATTGACTCCCATGTTCTTACAATTAAAGTGACAAATGAAGATGACTTGGTGCTGGTGGACAAAATTAATAATGCAGCGGCTGTTAGTGATGCTCTGTTAATCTCAGAGGGTCAACATGCTTTTGCATTTATTCAACATGAAGGCAGTAATATTCACCTCTTTGTAAAGGACGTTAATGATTGGAATGGTGATTTACTCAAGGAAAGTATAATAATAGACCATCAAAGAGGGAACATTGAGAAGATTTTTATAAACAATTATGTGAGGACAGATAGATCGTACGGTTTTAGAGCATTGATGGTAATGGAAGATCATTCGCTATTATTAGTACAACAAGGAGAAATTGTCTGGAGTAGAGAGGATGGTCTTGCATCAGTTGTAGATGTCACAACGTCTGAACTACCTGTGGAAAAGGAAGGTGTGTCGGTGGCAAAAGTGGAACAGAACCTCTTTGAATGGCTTAAGGGACATGTGCTGAAGCTCAAAGGAACTTTAATGATTGCAAGCCCTGAGGATGTAGTCGCTATTCAAGCGCTGAGATTAAGGAGTTCTGAGAAAAGCAAAATGACTCGTGATCACAATGGTTTTCGGAAGTTGCTTATAGTACTTACAAGGGCAGGAAAGGTTTTTGCTTTGCACACTGGAGATGGTCGTGTAGTTTGGTCTATTCTTCTTCATACACTGCGTAAAACAGAAGTGTGTGAACATCCCGTTGGGCTTAACATTTATCAGTGGCAGGTTCCGCATCATCATGCCTTGGATGAGAATCCATCTATCCTTGTAGTTGGGCGATGTGGGCCAAGTTTGGCTGCACCGGCTGCTCTTTCGTTTATTGATGCATACACAGGGAAGGAACTCAATTCTTTGAGACTTGCTCATACCATTGCTCAAATTATTCCTCTGCCTTATACCGATTCAACTGAACAGCGTCTGCATCTAATTATAGACACAGACCAACATGCATACTTATACCCAAGAACTCCTGAAGCTATTGGCATTTTGCAACGTGAGTTTTCAAATGTGTACTGGTACTCAGTTGAGGCTGATAATGGTATTGTCAGAGGTCATGCCTTGAAGAGTAATTGCATTCACCAAATAGTTGATGAGTACTGCTTTGATTTCCGGGATTTATGGTCTATTGTATTCCCATCTGAATCAGAAAAGATTATCGCAACTGTAACCAGAAAATCGAATGAGGTTGTTCATACTCAAGCAAAAGTTATGACTGACTATGATGTCATGTATAAGTATGTATCGAACAATATACTTTTTGTCGCAAATGCAGCACCTAAAGCCACAGGGGAAATTGGAACAGCCACCCCTGAGGAGGCTTGGTTGGTCATCTATATCATTGATACCGTGACTGGTCGTATATTGCATAGAATGACACATCATGGTTGCCAGGGTCCTGTTCATGCGGTATTTAGTGAAAACTGGGTTGTCTATCACTATTTTAATCTCAGAGCACACAGATACGAGGTGTCAGTTATTGAGGTCTATGATCAGTCTCGAGCGGATAACAAAGATGTCTGGAAGTTTGTTCTTGGGAAGCATAACCTTACATCACCCATTTCTTCTTACTATCGACCAGAAGTTACAACAAAATCACAGTCGTACTTTTTTACCCATTCTGTGAAAGCAATAGAAGTGACTTTGACATCCAAGGGTATAACTTCTAAGCAGCTTCTTATTGGAACAATTGGTGATCAGGTTTTGGCACTTGATAAACGCTTTTTGGATCCTCGGCGCACTCTTAATCCCTCGCAAGCTGAGAAAGAGGAAGGAATTATTCCTCTGACCGATTCATTGCCCATCATATCTCAGTCCTATATTACACATTCCCTTAAAGTGGAAGGTCTGCGAGGCATCGTAACAGTGCCTGCCAAGCTGGAGTCTACATCCCTCGTCTTTGCCTACGGAGTAGATCTATTTTTTACTCAGATTGCTCCTTCTAGGACTTACGATTCATTAACTGAAGATTTCAGCTATGCTCTACTTCTTCTAACAATTGTTGCACTTGTGGCTGCAATATTTGTCACTTGGGTATTATCCGAGAGGAAAGATCTACAAGAGAAATGGAAATGA 2955 0.4095 MAMAIRVFLLLLFFLSSTNIGYSLFEDQVGLMDWHQQYIGKVKHALFHTQKTGRKRVLVSTEENVVASLDLRHGEIFWRHVLGTNDVVDGLDIALGKYVITLSSDGSILRAWNLPDGQMVWETSLQGSKTSKSILYISKNLKADKDDLILVFGKGSLHAVSGIDGEVLWRKDFAGESSIEVSHIIQSTDKIYAAGFVGSSKFYVYGLNADTGKLLKDDHTILPCDTFGELLSVSGDKFVVLDKMRSKILTINIKNGEISYKQKLISDLIKDSSGQAVILPSRLPELFALRIDSHVLTIKVTNEDDLVLVDKINNAAAVSDALLISEGQHAFAFIQHEGSNIHLFVKDVNDWNGDLLKESIIIDHQRGNIEKIFINNYVRTDRSYGFRALMVMEDHSLLLVQQGEIVWSREDGLASVVDVTTSELPVEKEGVSVAKVEQNLFEWLKGHVLKLKGTLMIASPEDVVAIQALRLRSSEKSKMTRDHNGFRKLLIVLTRAGKVFALHTGDGRVVWSILLHTLRKTEVCEHPVGLNIYQWQVPHHHALDENPSILVVGRCGPSLAAPAALSFIDAYTGKELNSLRLAHTIAQIIPLPYTDSTEQRLHLIIDTDQHAYLYPRTPEAIGILQREFSNVYWYSVEADNGIVRGHALKSNCIHQIVDEYCFDFRDLWSIVFPSESEKIIATVTRKSNEVVHTQAKVMTDYDVMYKYVSNNILFVANAAPKATGEIGTATPEEAWLVIYIIDTVTGRILHRMTHHGCQGPVHAVFSENWVVYHYFNLRAHRYEVSVIEVYDQSRADNKDVWKFVLGKHNLTSPISSYYRPEVTTKSQSYFFTHSVKAIEVTLTSKGITSKQLLIGTIGDQVLALDKRFLDPRRTLNPSQAEKEEGIIPLTDSLPIISQSYITHSLKVEGLRGIVTVPAKLESTSLVFAYGVDLFFTQIAPSRTYDSLTEDFSYALLLLTIVALVAAIFVTWVLSERKDLQEKWK* 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1048 984 Gene3D - 33 332 IPR015943 GO:0005515
Vra5g1048 984 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 56 530 IPR011047 -
Vra5g1048 984 SMART ire1_9 706 753 IPR018391 -
Vra5g1048 984 SMART ire1_9 127 172 IPR018391 -
Vra5g1048 984 SMART ire1_9 92 124 IPR018391 -
Vra5g1048 984 SMART ire1_9 483 514 IPR018391 -
Vra5g1048 984 Pfam ER membrane protein complex subunit 1, C-terminal 766 983 IPR011678 -
Vra5g1048 984 Pfam PQQ-like domain 52 132 IPR002372 -
Vra5g1048 984 PANTHER UNCHARACTERIZED 9 984 IPR026895 GO:0072546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1048 K23562 - gmx:100807708 1796.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1048 5 16861650 16869330 Vra5g1048 5 16861650 16869330 ECH