Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1045 ATGGAGGAAGCAAAGGGACTCGTGAAACACATAGTGCTTGCAAAGTTCAAGGACGATGTCACTCCCGAGAAGATTGAAGAACTCATCAATGCCTTTGCAAATCTAGTCAATCTTGTCCCACCCATGAAATCCTTCCATTGGGGCAAAAATGTGAGTGCTGAAAACCTGCATCAAGGCTTCACTCATGTGTTTGAATCAACCTTTGAGAGTACAGAAGCCATTGCAGAGTATGTAGCTCATCCTACTCATGTTGAGTTTGGAAAACTGTTACTTTCCAATCTGGACAAAATACTTGTGATTGACTACAAACCTACCAGTTAA 321 0.4174 MEEAKGLVKHIVLAKFKDDVTPEKIEELINAFANLVNLVPPMKSFHWGKNVSAENLHQGFTHVFESTFESTEAIAEYVAHPTHVEFGKLLLSNLDKILVIDYKPTS* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1045 106 PANTHER - 1 105 IPR044662 -
Vra5g1045 106 ProSiteProfiles Stress-response A/B barrel domain profile. 8 102 IPR013097 -
Vra5g1045 106 Pfam Stress responsive A/B Barrel Domain 8 103 IPR013097 -
Vra5g1045 106 SUPERFAMILY Dimeric alpha+beta barrel 8 104 IPR011008 -
Vra5g1045 106 SMART Dabb_2 8 104 IPR013097 -
Vra5g1045 106 Gene3D - 1 106 - -
Vra5g1045 106 PANTHER STRESS-RESPONSE A/B BARREL DOMAIN-CONTAINING PROTEIN HS1 1 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1045 Vra-Chr5 16841680 16842665 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1045 - - gmx:100791148 184.111