Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1042 ATGATCAGAGGTGCCATGTACGTGTTTCTGGCTGCATTTTTGCTCTTCAATATTGGTGAACATGCTTCTGTAAGTTGTGCTTTGACGAGTGAGTTGCAGAGCAAAATTGCAGAAGCTAACAAAAAGGGGCCTTATCTGGGTTTAATCATACCAAATTCTTTTGAACTTAACCCTCTTCTTGAGAACCCAGGCTACACACCCTATGACACCGTAATAGACTTTGCGGGAAAGAGATTTCGGTTTGGAGCTATTGGTGACAAGCCTGTCGTACTGGTGATGACAGGATTGAGCTTGATAAATGCAGGTATAACAACTCAGCTTCTCCTGAGTTTCTTCGCAGTAGAAGGAGTAGTGCATTGCGGCATTGCTGGAAATGCAAACCCTTCATTGCATATTGGAGATGTAGCCATTCCCAAACAATGGGCTCATCTTACACTTTGGAGTTGGCAGAGACATGGACTGGGACCTAATGATACGTTACCCTTGGAAGACAATGGAGACTACACCAGAAAATTAGGGTTCTTAAAATTTGCAGATTTCACCACAAACGTAAGTGCTGATAGTTCCCCTGACAACCAACTAAACAATATATGGTACCAACCTGAGGAAATTTTTCCCGTTGATGGCGTTCCGGAACAAAGGCAGCATGCCTTCTGGGTTCCAGTTGATTCCATTTACTACAGCATTGCTGAAAAACTTCAGGGGTTGAAGTTAGAGTCGTGCGTAAACTCGACGACGTGCTTAAACTCAACGCCGAAGGTGCAGTTTGTGAAGAGAGGAATTAGCCAAAGCATCTATGTGGACAATTTGGCATACAGAACATTCATCTACAACAAATTTGAAGTGAGTCCGGTGGACATGGAAACTGCATCGGTCGCTCTTATATGCCTTCAACAAAGGATACCTTTCATTGCTATTAGGGCTCTCTCCGACTTGGCCGGTGGTGGCTCCGCCGAGTCCAACGAAGCCGATACCTTCTTATCCATCGCCGCCGCTAATTCTGTCACCGCCGTCATTGAGTTCGTTAAGCTCTTATCTTCCCACTCTAAGTAG 1053 0.4492 MIRGAMYVFLAAFLLFNIGEHASVSCALTSELQSKIAEANKKGPYLGLIIPNSFELNPLLENPGYTPYDTVIDFAGKRFRFGAIGDKPVVLVMTGLSLINAGITTQLLLSFFAVEGVVHCGIAGNANPSLHIGDVAIPKQWAHLTLWSWQRHGLGPNDTLPLEDNGDYTRKLGFLKFADFTTNVSADSSPDNQLNNIWYQPEEIFPVDGVPEQRQHAFWVPVDSIYYSIAEKLQGLKLESCVNSTTCLNSTPKVQFVKRGISQSIYVDNLAYRTFIYNKFEVSPVDMETASVALICLQQRIPFIAIRALSDLAGGGSAESNEADTFLSIAAANSVTAVIEFVKLLSSHSK* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1042 350 PANTHER BARK STORAGE-LIKE PROTEIN 6 347 - -
Vra5g1042 350 SUPERFAMILY Purine and uridine phosphorylases 40 348 IPR035994 GO:0003824|GO:0009116
Vra5g1042 350 CDD MTAN 46 341 - -
Vra5g1042 350 Gene3D Nucleoside phosphorylase domain 45 344 IPR035994 GO:0003824|GO:0009116
Vra5g1042 350 Pfam Phosphorylase superfamily 46 342 IPR000845 GO:0003824|GO:0009116
Vra5g1042 350 PANTHER PURINE NUCLEOSIDE PHOSPHORYLASE 6 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1042 Vra-Chr5 16822809 16824757 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1042 - - var:108321825 660.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1042 5 16822809 16824757 Vra5g1042 5 16822809 16824757 ECH