Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1034 ATGTGTTCTATGCTTCTAAACTGGCTGAGATTCGGAAAACTGAATAAAGATTACAGCAACACCAATGTGTTTGAGCATTCAAACAAGTTTTACTCGGTTTCGGAGAATCACATCCCACAAGAGATTGACATCTTCACACTAAATACTTTAAAGTACTGGGATGTCAATGGCGCATGGAATCGTCCCTTTGCAAGTCACCCCAAGAAAGTTCTGGGTACTGGAGAACTAGTTATTTTTGGTGTAGATGCAACTAAACCTTATCTTGAAATTGGAATAGTATCGGCTGAAGGAAACGAGCTGGTTCACAAAGCAGATATAAAACTAGACAGAAGCAGTTTATGCCATGACATAGGTGTCACAAGCAGGTATATAGCGATATTGGATTTTCCACTGATAGTTGATTCAAACAGACTACTTAGAAGAGGCCAATTAATCAAATTCGACAAGGAGAAATATGCCAGGATTGGGATAATGCCGCTCTATGGTGATGCTAACTCAATCAAGTGGTTTGAGGTGGAACCTAATATCACTTTTCATCTCATCAATTCCTTTGAGGATGGTCATGAGGTTGTGTTGTGGGGTTGTAGAGCACTAGATTCAATAATTCCAGGACCTGAAGATGGTTTGAAGGAATCTAAGTTATTCTCTCGATGTTACGAATGGAGATTAAACATGAAAAGTGGAGAGGTTAAGGAAAAATATCTCACCGGACCAGAACAATACATGGATTTTCCAATGATCAATGCAAGTTTTACAGGAATTAAGAACAGATACGCATACACCCAAGTGGTTGATCCCACTGCAAGTTTTGCTGCAGATATTCCTAAATACGGTGCTTTAGCAAAGCTATACTTTGAAGAACCATGTTCAGAATTCCCTGTGGGAGAGGCACAACAAGAAGAGCTTATAAGGGTAGAATATCATAGGTTTGAAAAAGATGTATTTTGCACTGGATCTGCGTTTGTCCCTAAGGAAGGTGGCGTTGAAGAAGATGATGGTTGGATAATCACTTTTGTTTACAATGAAGATAATGGCATTTCTCAAGTTCATATAGTTGACACGAAGAAGTTTTCAGGAGAGGCAGTTGCCAAAATTACAATACCTTGCAGAGTTCCATATGGATTTCACGGAGCTTTCATGCCAATCTCATTTTAG 1155 0.3922 MCSMLLNWLRFGKLNKDYSNTNVFEHSNKFYSVSENHIPQEIDIFTLNTLKYWDVNGAWNRPFASHPKKVLGTGELVIFGVDATKPYLEIGIVSAEGNELVHKADIKLDRSSLCHDIGVTSRYIAILDFPLIVDSNRLLRRGQLIKFDKEKYARIGIMPLYGDANSIKWFEVEPNITFHLINSFEDGHEVVLWGCRALDSIIPGPEDGLKESKLFSRCYEWRLNMKSGEVKEKYLTGPEQYMDFPMINASFTGIKNRYAYTQVVDPTASFAADIPKYGALAKLYFEEPCSEFPVGEAQQEELIRVEYHRFEKDVFCTGSAFVPKEGGVEEDDGWIITFVYNEDNGISQVHIVDTKKFSGEAVAKITIPCRVPYGFHGAFMPISF* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1034 384 PANTHER OS06G0162550 PROTEIN 1 382 - -
Vra5g1034 384 PANTHER BETA-CAROTENE DIOXYGENASE 1 382 IPR004294 GO:0016702
Vra5g1034 384 Pfam Retinal pigment epithelial membrane protein 12 381 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1034 Vra-Chr5 16753384 16755613 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1034 - - vra:106760380 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1034 5 16753384 16755613 Vra5g1034 5 16753384 16755613 ECH