Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1033 ATGGCAGCTTCATTCGCTACTCTCCCACCTTATTGCTCCATTCAGAAGAGACCCTTTACCTTCCAACACCATCTCATTACTTTCAGACTTTCCTCAAACACTAAGCTCATCTTAAGAGCCCTACCTCACATTAAAACCAAATTTCTTAACGCTGTTGTGGATTCAGCCTTTCAGTTTGTCGACCAGCTTGTGCTTCCATCTCAGACAAACTTTGCTCCGGTGGAGGAATTAGGGGAAGCCATGGATATCAGTGACATTGAAGGCCACATGCCAGATAATTTTCCGGATGGTGTCTACATTAGAAATGGTTCGTAA 315 0.4381 MAASFATLPPYCSIQKRPFTFQHHLITFRLSSNTKLILRALPHIKTKFLNAVVDSAFQFVDQLVLPSQTNFAPVEELGEAMDISDIEGHMPDNFPDGVYIRNGS* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1033 104 PANTHER BETA-CAROTENE DIOXYGENASE 26 104 IPR004294 GO:0016702
Vra5g1033 104 PANTHER OS06G0162550 PROTEIN 26 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1033 Vra-Chr5 16748881 16750021 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1033 - - vra:111241584 213.001