Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1032 ATGGCCACTTCTTATAAACCATTCATATCGAATTGCTTCATTCAGAGAAGAATCTCCCATGTCTCACAAAAATCTCCTCACTTCAACCTTCCACCCTTCCCTACCTTCAAGCAGCCACTCAAGAAAATTCTGCCTGGACTCCCTTTACTAATTGATGTTCAAAAGACTATGACAGACGCTGCAGCTAAATTGCTTGAAGCTTTTGTAGATTCATTCTTTCAATTTGTTGACCAGCCACTGCTTCCATCTCAGAGTAACTTTGCTCCGGTGGAGGAGTTGGGTGAAGCCATTCTTGTTACCAGCATCCAAGGATCAATTCCTGATGATTTTCCAGAGGGTGTTTACATTAGAAATGGACCAAATCCAGTTTTTGGAGGACTAAAATCAACAAATTCTATCTTTGGGAGGTCAAGTCACATTTGGGTGGAAGGAGAGGGAATGCTCCACGCAATTTACTTTAAAAGGTCAAGTCAAGGGAGCTGGAAGGTTCTTTACAACAACAAGCACGTTGAAACCGATACATACAAGATAGAAAAGCAACTCAGCAAACCATCGTTTCTACCGGCCATTGAAGGCGATTCACTCGCCATTTTGTCTGCTTATCTGCTAAACTGGTTGCGATTTGGCAAAGTAAACAAGTATATCAGCAACACCAATGTGTTTGAGCATTCTGGGAAGTTTTACTCGGTTGCCGAAAATCACATTCCACAAGAGATTGATATCTTCACACTAAAAACTGTAAGAAATTGGAATGTCAATGGAGCCTGGGATCGTCCTTTTACGAGTCATCCAAAGAAGGCTCCAGGTACGGGTGAGCTAGTAACGTTAGGGGTTGCCCCAACCAAACCTTTTGCCGTTGCTGGAATTATTTCTGCTGATGGAGAGAAATTGGTTCAAAGAGTTGACCTCCAACTAAATAGGTGCACTCTTTGTCATGAAATTGGTGTTACAAAGAGGTACATTGTGATCATGGATTTTCCTCTAACTATTGATCTAAACAGACTTCTTAGAGGAGGCCGATTAATAAAGTATAATAAGGAGGAATACGCAAGGATTGGGATACTACCACGCTATGGTGATGCCAACTCTATCAAATGGTTTGAGGTGGAACCTAACTGCACTTTCCACATTATCAACTCTTTTGAGGATGGACACGAGGTTGTAGTGAGGGGTTGCTCATCTCTGGATTCGCTAATTCCTGGACCTAACCTAAGTTTGAAGGAACACGAGGGGTTATCTCGCTGTCACGAGTGGCGATTGAATATGCACTCAGGAGAAGTTAAGGAGAAAGATATCTGTGGAGGCAATGTAGTTTATATGGATTTTCCTGTGATCAATGGAAACTTCATAGGAGTGAGGAATAGATATGCATACACCCAAGTAGTCGATCCAATTGCAAGCTCTGATCAAGGAGCGCCAAAATATGGAGGTTTGGCAAAGCTTTACTTTGAAGAATCATGCAAGGGAGACAAAGAAAAAGCAGAAGAGGGTGTAAGAGTGGAGTGCCATATGTTTGAGAAGAACACATTTTGCAGTGGGGCTGCCTTTGTCCCCATAGAAGGGGGTCTTGAAGAAGATGACGGTTGGATCATAGCTTTTGTTCACAATGAAGATACTAACATATCTGAAGTTCATATAATCGACGCAAAGAAGTTTTCTGGTGAAGTGGTCACTAAAATTACAATGCCTCGCAGAGTACCATATGGGTTTCATGGAGCTTTCATGCAAATTTCTTTTCAGGCACAGGAGCACAACAGTGTGTATCACCAACAAACGCCTTAA 1782 0.4209 MATSYKPFISNCFIQRRISHVSQKSPHFNLPPFPTFKQPLKKILPGLPLLIDVQKTMTDAAAKLLEAFVDSFFQFVDQPLLPSQSNFAPVEELGEAILVTSIQGSIPDDFPEGVYIRNGPNPVFGGLKSTNSIFGRSSHIWVEGEGMLHAIYFKRSSQGSWKVLYNNKHVETDTYKIEKQLSKPSFLPAIEGDSLAILSAYLLNWLRFGKVNKYISNTNVFEHSGKFYSVAENHIPQEIDIFTLKTVRNWNVNGAWDRPFTSHPKKAPGTGELVTLGVAPTKPFAVAGIISADGEKLVQRVDLQLNRCTLCHEIGVTKRYIVIMDFPLTIDLNRLLRGGRLIKYNKEEYARIGILPRYGDANSIKWFEVEPNCTFHIINSFEDGHEVVVRGCSSLDSLIPGPNLSLKEHEGLSRCHEWRLNMHSGEVKEKDICGGNVVYMDFPVINGNFIGVRNRYAYTQVVDPIASSDQGAPKYGGLAKLYFEESCKGDKEKAEEGVRVECHMFEKNTFCSGAAFVPIEGGLEEDDGWIIAFVHNEDTNISEVHIIDAKKFSGEVVTKITMPRRVPYGFHGAFMQISFQAQEHNSVYHQQTP* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1032 593 Pfam Retinal pigment epithelial membrane protein 88 575 IPR004294 GO:0016702
Vra5g1032 593 PANTHER BETA-CAROTENE DIOXYGENASE 44 577 IPR004294 GO:0016702
Vra5g1032 593 PANTHER OS06G0162550 PROTEIN 44 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1032 Vra-Chr5 16739890 16743520 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1032 - - vun:114164271 1124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1032 5 16739890 16743520 Vra5g1032 5 16739890 16743520 ECH